| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1742 |
|---|
| Symbol | |
|---|
| ID | 4710353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1912897 |
|---|
| End bp | 1913733 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639856210 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001003308 |
|---|
| Protein GI | 121998521 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4544] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAG CTGCCCTGCA ACCGCTGCTG GACGATCCGC GCATCTGGCG CCCCGGCCGC
CGGACCGAAA CCGCCCGGCA CGCCGCCCTG GGTACCGGCT ATCCGGAGCT GGATGCTGCC
CTGCCCGATG GTGGCTGGCC GCTGGGCACC GTCACCGAGA TCTTCCACCA GCAGCCCGCC
ATCGGCGAAC TCCAGCTGAT CCTGCCCTCC CTGGCAGCAC TGAGCCGACG CAGACAGTGG
CTGGCCCTGG TCGCTCCCCC CTACATCCCC TACGCTCCCG GGCTGGCCCA CGCCGGCGTG
GACCTCTCGC GGGTCTTGCT CATCCACCCC CGAGCCCACG AGGACCACCT CTGGGCCATC
GAGCAGGCCC TGCGGAGCGG GACCTGCGGT GCGGTGGTGG GCTGGCCCCG GCAGGCCGAC
CGGACCACCC TGCGCCGGCT GCAGCTGGCC GCCGAGACCG GTGGTAGCTG GGCCGCACTG
TTTCGTCCGC ACAGCGCACG GCACCAGGCC TCCACGGCGG CGATCCGCCT GGCCCTGCAA
CCGGAGGAAG ACGCCACCCT TGGCATCGAC CTGCTCAAAT GCCGAGGCGG GCAACCGCGC
CGGCTGCAGC TTCGCCCGGG GGAGGCCGTA CACCCGGCGA CCGACGCCCC CGCCGCCACG
ACCTCGCCGT ACCCGGCCCC CCGTGCCGCG GGTGCCACCG GGACGGCTGA ACCGCCCCTT
CAGGAGGCCC CGTACGGCGA TCGCGCCCGC CAGGCTGCGC CACCTCCCCG CGGCCGACCG
CGGCGGCAGG CGCCCCGCTC CCGGCGGGCC GCAGGGCAGC TACCCCTCCC TCTGTAG
|
|---|
| Protein sequence | MSEAALQPLL DDPRIWRPGR RTETARHAAL GTGYPELDAA LPDGGWPLGT VTEIFHQQPA
IGELQLILPS LAALSRRRQW LALVAPPYIP YAPGLAHAGV DLSRVLLIHP RAHEDHLWAI
EQALRSGTCG AVVGWPRQAD RTTLRRLQLA AETGGSWAAL FRPHSARHQA STAAIRLALQ
PEEDATLGID LLKCRGGQPR RLQLRPGEAV HPATDAPAAT TSPYPAPRAA GATGTAEPPL
QEAPYGDRAR QAAPPPRGRP RRQAPRSRRA AGQLPLPL
|
|---|
| |