| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1718 |
|---|
| Symbol | |
|---|
| ID | 4710222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1884867 |
|---|
| End bp | 1885712 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639856186 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001003284 |
|---|
| Protein GI | 121998497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGC ACACGCCGGA GCGGGGGACG CCGCGCCGGG TCGTGGTCCT GCTGGATGCC
TCGCGCGCCA GCCTGGAGGC CCTCGAGGCC GCCGCCGAGA TAGCGGCCCA CCGTCGGGCC
GAACTGCTGG CGATCTTCGT CGAGGAGGAG GCCCTGCTGC GCTGCGCCGG ATACCCCTGG
GCCCGCGAGG TGGGCCTCTC CGGGGCCACC CGCCCCCTGG AGACCGACAT CGAAGAGCAG
CGCATGCGCA CCCGCGCCGA GGAGATCCGC CGCGCCTTGG CGTACACCGG TCAGCGCCGG
GGCGTGCACT ACCGCCTGGA GGTCTGCCGG GGCGGGGTCG TCCGCGAGAC CCTCAGTCTG
GTCGACCGCG ATGACCTGCT GATACTCGGC AAGGTGGGCT ACGCCCGCGC CCGCGGGCTG
CGCATCGGCT CCACGGCCCG CGCCATCGTC TTCGGCACGC CGGGGCCGGT GATGGTCTTC
GAGCGGCCAG TGCGGCCCCG GACGGGACAC GGCGTGGCCG TGGTCGTCGA GCCCGGCGAG
CCGGGCGTCG AGACGCTGAC CCGTGCCGCC GCCCTGCTCG GCGAGAGTGA GACCCTGGCC
CGGATCATCC CCGACCACAC TGCCCCCTCA CCCCCTGGCG ACAACCCGAC CCGCGCCTGG
GCGGCCCGAC ACTGCCCCGA CGCCCAGTGG CTGACGCCCG CCGGGTCGCC GACGGCCCTG
GCCCGGCACC TCAGCCACGC CCCCGTGGAC AAGCTGATCA TCAGCCGCCG CAGCGCCCTG
CTGGCCGAGC ACAACACCCG CTCGCTGATC GAGACGGTGC AACTCCCGGT GCTGGTGGTG
CCCTAG
|
|---|
| Protein sequence | MTEHTPERGT PRRVVVLLDA SRASLEALEA AAEIAAHRRA ELLAIFVEEE ALLRCAGYPW
AREVGLSGAT RPLETDIEEQ RMRTRAEEIR RALAYTGQRR GVHYRLEVCR GGVVRETLSL
VDRDDLLILG KVGYARARGL RIGSTARAIV FGTPGPVMVF ERPVRPRTGH GVAVVVEPGE
PGVETLTRAA ALLGESETLA RIIPDHTAPS PPGDNPTRAW AARHCPDAQW LTPAGSPTAL
ARHLSHAPVD KLIISRRSAL LAEHNTRSLI ETVQLPVLVV P
|
|---|
| |