| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1579 |
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| Symbol | |
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| ID | 4710386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1719462 |
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| End bp | 1720436 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639856043 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001003145 |
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| Protein GI | 121998358 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCGG TACAGCAGAT GGAACTCGGC GACAGACTCA TGCTCCACAA TCCAGTAAGG
ATCACCAATA CCGCTTGCAG TGGAACTTGC CCGCAGAGAA AGCTGGATAT ACTCCAGCAA
GTCGCCGGCA TCGGCTTCTG GGAGCTTGAC CTGAAAACCG GTCATGTCTG GCTCGATGGC
CGTTTACAGG AGATCTACGG CCTCTCTCCC GGAGAGAACA ACCTGGGGAT CGAACTGAGG
ACTTGGCGTA AGTATGTCCA TCCAGAGGAC CAACCACGGG TTCAGCAGGG TTTCTGGCGC
GCCGCCGAGT TAGCTTTACC CTGGCGCCTG CAGTTCCGTG CCATCCGCCC AGACCAACAG
GTGCGGCACA TCCGCTCCGA GGGTCGACTT GAACCGATCC CGAACGACCA GTCCGTATAC
TTTGTCGGGT TTGAGGAAGA CGTCACCGAC CGCGTGGCCC TTGAGCAGGA ACTGGAGCGG
CAAGCCCAGC AGGATGGGCT GACTGGCACC TATAACCGCC GAAAGATGGA CAACCTCCTC
CACCAGGAGC GCGAGCGGGC GATTCGGTAC CGCCAGCAGC TGACGGCCAT GCTCATCGAC
GCGGACGGTT TTAAGGCTAT CAACGACAAC TACGGGCACG AGGCCGGCGA TGAACTTCTT
CACGATCTCG TGCACTGTTG TTTCCGCCCG TGCCTGCGCA CCATCGATCA CCTCGGGCGC
TGGGGTGGTG ACGAGTTCCT CGTAATCCTT CCGGAGACCT CGGAAGAGGC CGCTTATCAC
GTTGCGGAGC GCATCCGTGA CCAGGTCGAG ACGCTCCAAC CGGGCCCGGG GGCAATTACC
GTGAGCATCG GGATCTCGGC CTACCAACCG GAGGAATCAC CCCGGGACTG GTTGCGCAGT
GCGGATTTCG CTCTGTACGA GGCCAAGCGC GGGGGACGCA ACCGAATCAC CCGCTACCGT
TCACCACCCG CGTGA
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| Protein sequence | MDPVQQMELG DRLMLHNPVR ITNTACSGTC PQRKLDILQQ VAGIGFWELD LKTGHVWLDG
RLQEIYGLSP GENNLGIELR TWRKYVHPED QPRVQQGFWR AAELALPWRL QFRAIRPDQQ
VRHIRSEGRL EPIPNDQSVY FVGFEEDVTD RVALEQELER QAQQDGLTGT YNRRKMDNLL
HQERERAIRY RQQLTAMLID ADGFKAINDN YGHEAGDELL HDLVHCCFRP CLRTIDHLGR
WGGDEFLVIL PETSEEAAYH VAERIRDQVE TLQPGPGAIT VSIGISAYQP EESPRDWLRS
ADFALYEAKR GGRNRITRYR SPPA
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