Gene Hhal_1547 details

Gene Information

• Locus tag: Hhal_1547
• ID: 4710263
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 1681464
• End bp: 1684859
• Gene Length: 3396 bp
• Protein Length: 1131 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639856014
• Product: VanZ family protein
• Protein accession: YP_001003116
• Protein GI: 121998329

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCAA CCCCAACACC CGATCACCCC CTGAGCTACC GTGCCTGTGT CTTGGGCGCA 
TCGCTGAGTC TAGCAGTCAT TGCCTATGCC ACCCTCCTGC CGTTCGAATT CCGGGATGTC 
AGCCTCGCTC AGGCCTGGGA AGCCTATACC GGGATTCGGT TTGCGGGGCT CACCGGGGGC 
AACTACGCCC AATGGGTGGC CAACATCCTC CTGTACACCC CCCTGGGGTT CTTCTGGGCG 
GCCTGGCTAA CGCGCAGCGT CGGCAGCCGA TCCGGGCAGG TTGTGATGGG CCTGCTGGCG 
GCCCTGGTGG CCCTGGCAAC CACGATGACC ATCGAGTTCC TGCAGATCTG GCTGCCCTTT 
CGGTACCCGG CCATCGCCGA TATGTCCGGG AACTTTCTGG GTGGAGTGAT CGGGGTGGTG 
GTCTGGTTGA CCCTACGCGG TCGTCTGGGC GTCTGGCTTG CGGAGATACG TCAGGGTGGC 
CCGGTGGCCG TCGGGATCGC TCTATCGGCG TATGCCGTAG CGTATATCGG GATCGTCCTG 
CTGCCTTTCG ATCTCGTGGT CAGCCCCTGG GCGCTCGCCG ACCGGTTGAC TTCGAGCGCG 
TTAAACCCCT GGGCGCAGGC TGGGGGATGC CTGGGGGATC TCTCCTGTGT GGGATTCCGT 
GGCGCCGAAG TGGCGGCCAG TCTGCCGCTG GGCGTGTTGC TGGCGTGGAC GGTGCCGCAG 
GTTCGAGACG ACCCGTGGCG GTTCGGCCTG GCTGCAGTAG TCGGTTGGGC GGTCAGCCTG 
GAGTTGCTCA ATCTTTTCGT GGCCTCCGGG GTCGTAGAGG GTCGTTCAGC GCTGATGCGC 
GCCATTGGCA TTGGCCTGGG GCTCGGGGTT GCAGGCTTGT TGTTGGCCGA TCCGAGCCGG 
CTTTTGGCCC GGTTGCGACA ATGGGGGCCG CTCCTGGTAG CCGGAGTGGC CGTTCCGTAC 
CTCCTGCTCT TGCTCCTGGG CAACCACGAG TTCGGTCCCT ACCGCTGGGA TGGGCAGCGG 
GCGATCGAGA CGCTGCAGGC CACTCGGTTA CTCCCCTTCT ACTACCACTA TCACATCGCC 
GAGGTGGCGG CCCTGCGCAG CATGCTTTTC CATATGCTCA TGTATGCGCC GGTGGGGCTG 
TTCGCCTGGA TCCTGGCGCT GCGTGTGCGG GTCTCGCGTA ATCAGGTTGT GGCCTGGGCG 
GCTGGCGCGG CGGTGGGGCT GGCGTTGTTG GTGGAAATCG GTAAGTTGCT GACGGAAGAG 
GGGCGGCCGG ATTCCAGTAC CTTGGTTTTG GCAGGCATCG CAGCCGCGAC CACCGTCACT 
CTGCTCGAAT GGTTGGCCTT CGCCCTCACG CGCAAGGGGC CGGGTGACTC CGCCGGCGAG 
CTGGCAAGTC CGCCGCCGGG TCCGATTCAG CCGGGGCAGG ACCCCGGCTT GGCCCAAGCG 
GTTCCGCCCT ATGCAGGGAC GAGTCCGACG AATGAGAGGA GATGGACCGC GGGAGAGGTG 
GTGCGCCGCA GCAGTGGCGG CTTGCTCGCG GTGGCGATTT GGCTCGCCGC TTGGGCCTGG 
CCGGCCTGGC CCGGCTGGTT GGCCGCCGGG CTTTTGATCT ACGCAGTGCT ACTCTGGCGC 
TACCCGCTGG CGTGGCTGTG GGTGTTGCCG CCCCTGGTGC CTGTTCTCGA CTGGGGGGTA 
TGGACCGGCT GGGTGCATAT CGGGGAGGTC GATCTCTTCA TCGGCATGAC CGTGGCGGTC 
ACCCTGGCTG CGGGGCGGTG GCCGGGGCGT CCTGGCCGCT GGCTTCCCGG AACAGTCCGT 
GCCGCCTGGG CCTTGTTGCT GGTGTCAACG GTGCTCGCTC TCGCAGTGGC CCTCTGGCCG 
CTGGCGCCGC TTGAGCGCGG GCTGCTAAGC CACTATGCCA CCGGCTGGAA CGCCCTGCGC 
GTGGGTTCCG GGGTTCTATT CGCTGCGCTG CTCTGGTGGG TGGTTCGTGC CAGTCCGTAT 
TCACCCAGTG AGCAATTCGA GCGCGGCCTG GTGCCCGGCA TGGCGCTGAG TTGGTTGGCT 
GCCGCCTTGG TGATCCTGCG CGAGCGGATC GTCTACCCGG GGCTGCTGGA CTTCGACAGT 
GCCTATCGCA TCTCCGGCTG GTTCTCGGAT ATGCAGGTCG GCGGCCCCAG TGTCGAGGCG 
TTCCTGGTGA TCAGCCTGCC GTTCGCCATC CTCGCGGCCT GGCGTGTGAG CGGGCGCTGG 
CTCGCGGTGC CCGCTGCCGG CGTCGTCGCG GTACTGGGCA GCTACTTGGT CGTGGTGACC 
TACTCCCGGG CCGGTTGGTT GGGGTTGGTG GTGGCCCTCG GCGTGCTAGG GCTTTCGCTC 
CTCTGGGCCT CTCGTCGCCC CGTTGCGGGG CGAGGCCTTT GGGCAGTGCA CCAGGCGTTG 
ATTGCGCTTC CGTTCCTGGT GGCCGGAGGT GCCGGTTTTG CATTGGTCAT GGAGGGCACG 
GCGGTGGAGC GGTGGTCAGC CGTCGAGCGG GATCTGCAAT CGCGCATCGA CCACTGGCAG 
GAGACGTGGT CCCTTGCCGG GCAGGGGGGC AGTCCGGTCT GGGGGCGGGG AATGGGTGCC 
TTCCCGGCCT ACTATCGATA CGCTGCGGTG GGCCAGGAGG GGGTGCCCGC CAACTTCGAG 
TTCGCGCGTA CCGGCAGCGA TGAAGGGGTT TTGCGCATTG GCGCGGGGTC GTCCCTGTTC 
GTGAATCAGC GCCTCTTTGG CCCGTTCCAC GGGGAGCGCC CGGAGGCCCT GCAGCTTGAG 
CTCGAGGTTC GAGGGCCGCC CGGTGCCCGA CTGGATGCCA GCATCTGCGA AAAGCCCATC 
CGTCACTCCT TTGATTGTCA GTGGGAACGC TTCCGCCTGG ATGCGGGTGA AGGGGTACAA 
GCCCTCTCCT GGGACGTCCG CCTCGACGAT CTGGCGTCGG GCCTCCCGGG CCTGCGCCGG 
GGGTTGGTCT TTGCCCTGTC CCTCGGTGGG GGCGAGGAGG CCATGCTGGA GATCCAGTCG 
GCGAAGCTGA CTGGGCCGGA CGGCGCGGCC TACCTGCGCA ACCCCGAATT CGAGCAGGCC 
GGCCGCCACT GGTACTTCAC CACCGACTAT CTTTGGCCCT ACCGGACGGA GAACCAGTGG 
CTGGAGATCT ATTTCGATCA GGGGGTATTC GGACTGCTGG CCTTTACCCT GTTCCTGCTC 
GCCGTCGTCG GGGTCCTGCT GCGGCGCGTG AGTCAGGGCA AGGTCGGCGC AGCAGCGGCG 
CTGGCCGCCC TGCTCGGAGT CTTGGCCATC GGAGTGTTCA GTACGGTGTT CTTTAACCCG 
AAGATCGCCT TGCTGTTCTA TCTGGTGGCT TTGCTGGGCG TCTCGGGCCG TGCGCGCAGG 
CGCAGCGGGC GCCGTGCCCC GATTGGGCAA CCGTAG 

 

Protein sequence

MPSTPTPDHP LSYRACVLGA SLSLAVIAYA TLLPFEFRDV SLAQAWEAYT GIRFAGLTGG 
NYAQWVANIL LYTPLGFFWA AWLTRSVGSR SGQVVMGLLA ALVALATTMT IEFLQIWLPF 
RYPAIADMSG NFLGGVIGVV VWLTLRGRLG VWLAEIRQGG PVAVGIALSA YAVAYIGIVL 
LPFDLVVSPW ALADRLTSSA LNPWAQAGGC LGDLSCVGFR GAEVAASLPL GVLLAWTVPQ 
VRDDPWRFGL AAVVGWAVSL ELLNLFVASG VVEGRSALMR AIGIGLGLGV AGLLLADPSR 
LLARLRQWGP LLVAGVAVPY LLLLLLGNHE FGPYRWDGQR AIETLQATRL LPFYYHYHIA 
EVAALRSMLF HMLMYAPVGL FAWILALRVR VSRNQVVAWA AGAAVGLALL VEIGKLLTEE 
GRPDSSTLVL AGIAAATTVT LLEWLAFALT RKGPGDSAGE LASPPPGPIQ PGQDPGLAQA 
VPPYAGTSPT NERRWTAGEV VRRSSGGLLA VAIWLAAWAW PAWPGWLAAG LLIYAVLLWR 
YPLAWLWVLP PLVPVLDWGV WTGWVHIGEV DLFIGMTVAV TLAAGRWPGR PGRWLPGTVR 
AAWALLLVST VLALAVALWP LAPLERGLLS HYATGWNALR VGSGVLFAAL LWWVVRASPY 
SPSEQFERGL VPGMALSWLA AALVILRERI VYPGLLDFDS AYRISGWFSD MQVGGPSVEA 
FLVISLPFAI LAAWRVSGRW LAVPAAGVVA VLGSYLVVVT YSRAGWLGLV VALGVLGLSL 
LWASRRPVAG RGLWAVHQAL IALPFLVAGG AGFALVMEGT AVERWSAVER DLQSRIDHWQ 
ETWSLAGQGG SPVWGRGMGA FPAYYRYAAV GQEGVPANFE FARTGSDEGV LRIGAGSSLF 
VNQRLFGPFH GERPEALQLE LEVRGPPGAR LDASICEKPI RHSFDCQWER FRLDAGEGVQ 
ALSWDVRLDD LASGLPGLRR GLVFALSLGG GEEAMLEIQS AKLTGPDGAA YLRNPEFEQA 
GRHWYFTTDY LWPYRTENQW LEIYFDQGVF GLLAFTLFLL AVVGVLLRRV SQGKVGAAAA 
LAALLGVLAI GVFSTVFFNP KIALLFYLVA LLGVSGRARR RSGRRAPIGQ P