Gene Hhal_1522 details

Gene Information

• Locus tag: Hhal_1522
• ID: 4709171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1650550
• End bp: 1651119
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639855989
• Product: type IV pilus assembly PilZ
• Protein accession: YP_001003091
• Protein GI: 121998304

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.138247
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGCCC TCGACCTGGC AGAGGAGTTG GCCGATTTCT GGCTCCCGGT ACTGGCGAAG 
CGCTCCTGGG AGGTGCGTGC CGACATGCTG GAGCAGATCC TTGGGCAGTT GGCGGACGAC 
ACCCCCGACC CCATGCTCTA CCGCCGCCTG GTCGCGTTTT TCCTGGCGAC CGCGATCGAT 
CGCCTTGCGG CCGATGAGCC GGTCGCCAGC CAGGCGCAGG CACGGATCTA CATCCAGTCG 
GCCGATCCGA AGCACCGCGC AATGGCCCTG GAACGCTTCC CCGAGGTCCA CTCACGCCCT 
GCGTGGCGCG GCCACCCCCG TAACAACCCC CTGGACCGAC GGGCCGCCCC GCGACACCGC 
CTAACCGCCG AAGCAGGCAT CGAAGCCGCC CGTACCAAGA TCACGTGTCG GATCCACAAT 
ATCTCAAAGT CCGGAGCCCT AATTACCCTA CATTTAATGC TTCAACCAAG CGATGAGGTT 
CACCTGACGC TGCGATCTCG CGACCAGCCG ATAAACGGTC AGGTGGCGCG GGTTTCCGAT 
CATGGCTGTG GCATCCTGTT CTGCGCATAA 

 

Protein sequence

MNALDLAEEL ADFWLPVLAK RSWEVRADML EQILGQLADD TPDPMLYRRL VAFFLATAID 
RLAADEPVAS QAQARIYIQS ADPKHRAMAL ERFPEVHSRP AWRGHPRNNP LDRRAAPRHR 
LTAEAGIEAA RTKITCRIHN ISKSGALITL HLMLQPSDEV HLTLRSRDQP INGQVARVSD 
HGCGILFCA