Gene Hhal_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1463 
Symbol 
ID4709736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1579188 
End bp1579745 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content64% 
IMG OID639855930 
Productribosome recycling factor 
Protein accessionYP_001003032 
Protein GI121998245 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.318607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAAG ATATCCAGGA AGACGCCGAT CGCCGGATGG CCAAGGCCGT CGAGAGCCTC 
AAGCACGACC TGGCTCGGCT GCGCACCGGG CGCGCCCACA CCAGCCTGCT TGACCAGGTC
AATGTCGAGT ATTACGGCAT GGAGGTGCCC ATCAAGCAGG CGGCCAATGT CAGCGTGGAG
GATTCGCGTA CGCTGGCCGT TACACCCTTC GAGAAGCACA TGGTGCCTGC CATTGAGAAG
GCGATCATGG CCTCGAACCT GGGGCTGAGT CCAGTCTCGG CCGGGCAGGT CATCCGGGTG
CCGCTGCCCT CACTGACCGA AGACCGCCGC AAGGAGATGG TCCGCTTGGT CAAGAACGAG
GCCGAGCAGG CCCGTGTCGC CATCCGCAAC GTCCGCCGGG ATGCCAATTC GGACCTTAAG
GACCTCGCCA AGGGCAAGGA CATCACCGAG GACGAGGAGC GCCGCGCCCA GGAGGCCATC
CAGAAGCTCA CCGACCGGTA TGTGGCGCAA GTCGACGACC TGCTCGAGGA GAAAGAACGC
GAGCTCATGG AGGTCTGA
 
Protein sequence
MIEDIQEDAD RRMAKAVESL KHDLARLRTG RAHTSLLDQV NVEYYGMEVP IKQAANVSVE 
DSRTLAVTPF EKHMVPAIEK AIMASNLGLS PVSAGQVIRV PLPSLTEDRR KEMVRLVKNE
AEQARVAIRN VRRDANSDLK DLAKGKDITE DEERRAQEAI QKLTDRYVAQ VDDLLEEKER
ELMEV