| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1460 |
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| Symbol | |
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| ID | 4710639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1576410 |
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| End bp | 1577582 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855927 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001003029 |
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| Protein GI | 121998242 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.34737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTGG CAGTACTCGG GGCCACGGGG TCCATTGGTA CGAGCACCCT GGATGTGGCA
ATCAGGCACC CCGAACGTTT CGAGGTTCGG GCCGTGGCTG CAGGGCGCGA TTGGGAAGGG
TTGCTGCGGA TCTGCCGTGC GCACCGCCCC AGCCGAGCCG CGCTGGCCGA TGAGCAGGCG
GCGGCGCAGT TGCGCGATCG GCTTCAGGCC GAAGGCCTGG AGCACATCGA GGTCTCCGCG
GGCGAAGAGG GCGTGGCCGC GCTGGCGGCG GACGCCGACG TGGATGCAGT GGTCACGGCC
GTGGTCGGGG CGGCGGGGCT GGCCTCGTCC CTGGCGGCCT GCCGGGCCGG CAAGCGGATT
CTCCTGGCCA ACAAGGAGAC GCTGGTCGTC GCCGGTGCCC TGTTCATGGA GACGGCGCAG
CGCCATGGGG CGCAGATCGT CCCGGTGGAC AGTGAGCACA ACGCCGTATT CCAGGGGCTG
CCGACCGGCA CCGACGCCAC GGCGGGGGTG GAGCGCATCG TGCTGACGGC ATCCGGTGGC
CCGTTCCGCG ATCGGGATCC CGACACCCTG GCCGCCGTGA CCCCCGAGGA GGCCGTAGCC
CATCCGAACT GGTCCATGGG CCGCAAGATC TCCGTCGATT CAGCCACCAT GATGAACAAG
GGCCTTGAGG TGATCGAGGC CTGCCATCTC TTTGACCTGG AACCTCAGCG CGTCGATGTG
GTCATTCATC GACAGAGCTT GGTGCATGCG CTGGTGGGCT ATCGCGACGG TTCCTATTTG
GCGCAGGTCG GGTCGCCGGA CATGCGAGTG CCGATCTCCT ACGCCATGGG GTATCCCGAG
CGGATCGCCT CGGGTGTGGA TCTGGTGGAT CTGGCGGCCG CAGGGCGCCT CGACTTCGAA
GCAGTGGACG AGCGCCGCTT CCCCTGCCTC CGACTGGCCT ATCAGGCCCT GCGTACCGGC
GACGGCGCGT GCGCCGTACT CAATGCGGCC AATGAGATTG CGGTGGACGC CTTCCTCGAC
GGGCGTCTTC GTTTCGACCG CATTGCACCT GTGATCGAGG ACGCCCTGGC AGCGGAGACC
CCTCCGCCGC CGAAGGATCT GGATTCGGCC CGCGCCATCG ATGCGCAGGC CCGCCGTGTG
GCCGAGGAGG CCGTGCGGCG CATCGCGGAC TGA
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| Protein sequence | MRLAVLGATG SIGTSTLDVA IRHPERFEVR AVAAGRDWEG LLRICRAHRP SRAALADEQA
AAQLRDRLQA EGLEHIEVSA GEEGVAALAA DADVDAVVTA VVGAAGLASS LAACRAGKRI
LLANKETLVV AGALFMETAQ RHGAQIVPVD SEHNAVFQGL PTGTDATAGV ERIVLTASGG
PFRDRDPDTL AAVTPEEAVA HPNWSMGRKI SVDSATMMNK GLEVIEACHL FDLEPQRVDV
VIHRQSLVHA LVGYRDGSYL AQVGSPDMRV PISYAMGYPE RIASGVDLVD LAAAGRLDFE
AVDERRFPCL RLAYQALRTG DGACAVLNAA NEIAVDAFLD GRLRFDRIAP VIEDALAAET
PPPPKDLDSA RAIDAQARRV AEEAVRRIAD
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