Gene Hhal_1371 details

Gene Information

• Locus tag: Hhal_1371
• ID: 4711421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1479109
• End bp: 1479636
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639855838
• Product: cytochrome C biogenesis protein
• Protein accession: YP_001002940
• Protein GI: 121998153
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACAA GACTGTTTAC AGCGTTGCAG GCGCGCCGCG GCGAGACCCC GCGGGGGCTC 
CGCGAGCTGC TCGTGGCGCT TTTCCTGCTT GCTGGCGCGG CCATGGCGGC CCCGGCCGGT 
GCGGTCTCCA TCGGTGAACC CCTGGAGTTC GAGACCGAGG AGCAGGAGGA GCAGTACTAC 
ACCCTGGTCC GGCAGCTGCG CTGTACCGTC TGCCAGACTG AGACCATCTA CGAGTCGCCG 
GCCGAGCTGG CCGGCGACAT GCGCCGCCGG GTCTACGAGA TGACCGTGGA CGGTTACGAC 
AAGGACGAGA TCGTCGATTT CATGACAGCC CGCTACGGCG ATTACGTCCG CTACAACCCG 
CCGCTGCAGA TGAACACCGC CCTGCTCTGG GTCAGCCCCT TCCTGCTGCT GGTCATCGGC 
GGCGTGGCCT GGCTGCAGGT CGTCCGCCAT CGTCAGCAGA AGGCGGCGCA GACCGACCTG 
AGCGAATCCG AGCGGCGGGC GCTGGAACGC TTCCGGCGCG GCGACTAA 

 

Protein sequence

MSTRLFTALQ ARRGETPRGL RELLVALFLL AGAAMAAPAG AVSIGEPLEF ETEEQEEQYY 
TLVRQLRCTV CQTETIYESP AELAGDMRRR VYEMTVDGYD KDEIVDFMTA RYGDYVRYNP 
PLQMNTALLW VSPFLLLVIG GVAWLQVVRH RQQKAAQTDL SESERRALER FRRGD