| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1329 |
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| Symbol | |
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| ID | 4710881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1438317 |
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| End bp | 1439267 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855796 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001002898 |
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| Protein GI | 121998111 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.655349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC CCCACGAGTG GCTGCTCGAC GCATCCATCT ATTTCTCCTT TGACCGCAGT
GGCTCCGAGC GGCACGCCCG AACCTGGCCC GGCTTCCGGG ATCGTTTGCG AAGCGGGCCC
GACGAGGCAC TGACCGGCCT GGTCACCGGC GGCAGCCGGG GCATCGGTGC GGCTGCCGTG
CATCGCCTGC GCGGGATGGG CCACCGTGTG CTGAGCTGCG GTCGCTCGGA ACAGGCCGAG
GATACGGATT ACCGTACGCT GGATACCGGG GACTGGGCGG CTGTGGCGCG CACGGTGGAG
ACACTGCCGC CCCTGGACTT CATCGCTCTC AACGCCGGGG CGATGCCGGA GCGGTTCACG
TTGAACGCCG ACGGCGTCGA GCTACAGATG GCCTCTCAGC TCTTCGGCCA CTACCTGCTC
GTCCACAATC TGGCGCGGGC CGGCAAGCTG CGCGAAGGGG CCCGGGTGGT TTGGATGAGT
TCCGGCGGGA TGTACCTTCA GCGCCTGCAT CTGCGCCACC TGTTCGAGAA CGACCGCTAC
GACAAGGTGG CGACCTACGC CAACGTCAAG CGCGCGCAGA CCATCGTCAA CGCGCAGATG
GCGCGCATGC CCCTGTTTCG CAACGTCGGG TGCTTTGCCA TGCACCCGGG GTGGGTTGAT
ACGGCCGGCG TGCGCGAGGC CATCCCGGGG TTCTGGCGCT GGACGCAGGG CCGGCTGCGG
ACCCCGGAGC AGGGGGCGGA CACACTGGTC TGGCTGGTCA CGCGCGCCAG TTCCGGGGAG
GGCGCCGCGG ATGCCTCTAG CGCGCTCGAG TCGGGCGGCT TCTACTTCGA TCGCCGCCGG
GTGTCCCCCT ACCTGGTCCC CGGAACCCGG GAGACCGCCA CGGAGCGAGA AGCGCTGCTC
GAATACCTGG AGCGGTTACT GGCGCCGTAT CAAGTCGGGG TAACTCCCTG A
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| Protein sequence | MRKPHEWLLD ASIYFSFDRS GSERHARTWP GFRDRLRSGP DEALTGLVTG GSRGIGAAAV
HRLRGMGHRV LSCGRSEQAE DTDYRTLDTG DWAAVARTVE TLPPLDFIAL NAGAMPERFT
LNADGVELQM ASQLFGHYLL VHNLARAGKL REGARVVWMS SGGMYLQRLH LRHLFENDRY
DKVATYANVK RAQTIVNAQM ARMPLFRNVG CFAMHPGWVD TAGVREAIPG FWRWTQGRLR
TPEQGADTLV WLVTRASSGE GAADASSALE SGGFYFDRRR VSPYLVPGTR ETATEREALL
EYLERLLAPY QVGVTP
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