Gene Hhal_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1320 
Symbol 
ID4710846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1430260 
End bp1430742 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID639855787 
Productresponse regulator receiver protein 
Protein accessionYP_001002889 
Protein GI121998102 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACG GCTGCTTCGA GACGCTGCTC GCCTCTGTAC CGCGCCTGAC CTCGGGTCAG 
CGGCAGGCGC TGTTGCGGGC TCTGATGAGC GAAACCGCGG CGGGCGGGCC GGATCCGGTA
TCAACCTGTG GGGACGGTGG CGCAGCGCAC TCGGGGCCCG CAGAGTCGCT GTCCGTGCGC
GGGCTGGTGA TTGACCCGGC CCGTCACGAG GCCCGGGTTG AGGGTCGCGC CGTCGAGTTG
AGCCGCACAC AGTTCCGTCT GCTGCATTTC CTGGCGGCGC ATCGCCATCG CGTGGTGACG
CGCGATGAAC TCATCCGCGG CGTCTGGGGG CCGCGTGCCT ATCTGGAGTC GCGAACGGTG
GATGCGCATG TTCGCCGGTT GCGACAGGCG CTGCGTCCGG CCGGATATGA CCGCATGATC
CGCACGGTGC GCGGTGTGGG GTACCACCTG GATTCAAGCC GAGCCGAGAA GGAGGCAGCA
TGA
 
Protein sequence
MNNGCFETLL ASVPRLTSGQ RQALLRALMS ETAAGGPDPV STCGDGGAAH SGPAESLSVR 
GLVIDPARHE ARVEGRAVEL SRTQFRLLHF LAAHRHRVVT RDELIRGVWG PRAYLESRTV
DAHVRRLRQA LRPAGYDRMI RTVRGVGYHL DSSRAEKEAA