Gene Hhal_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1315 
Symbol 
ID4710837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1425981 
End bp1426616 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID639855782 
ProductMgtE integral membrane region 
Protein accessionYP_001002884 
Protein GI121998097 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACC ACGACACCAC ACAGAAACAC ACCGCCAGCG ATCTCGCCGA CAACGCCCTG 
CGGGACATCG ATAAGGCCCG CAGCGACCGC ATGCTCAACG GCCCGATCCA CTACCCGATC
CTTTACCGCG GCGGGCTGCT GCTGATCGTC ATGGCCGGCG GGCTGCTGGT CGGCGGACAG
GTGGAGCGCT TCGAGGAGAG CCTCGAGGCT CTGATCGTCC TCGCCTTCTT CATCCCCGTC
GTCATGGACA TGGGCGGCAA CATCGGCACG CAGTCGACCA CCGCCTTCGC CCGGGGGTTT
ACCCTCGGCC ACGTCTCCAC CGCCAATCTT TGGCGCATGG TCGGGCGTGA GCTGGTCATC
GGCCTGGTCC TCGGCGTGGT CATGGGCATC ATCGGCGGCA TCGCGGCCTC CCTGTGGCAG
GGGGATCCGA GCGTCGGCCT CGCCGTGGGC GGGGCACTGG CCCTCGGTCT GCCGATCGCC
ACCACCATCG GATTCCTGAT CCCCTACGGC CTGCTGAAGA TCGGCGTCGA CCACGTCCCG
GCCAGCGACC CGATCATGAC CACGGTCAAG GATTTCACCA TGGTCACGAT CTACTTCAGC
CTCGCCGCGA TGCTGATCGG AATCGACGTC GCCTGA
 
Protein sequence
MANHDTTQKH TASDLADNAL RDIDKARSDR MLNGPIHYPI LYRGGLLLIV MAGGLLVGGQ 
VERFEESLEA LIVLAFFIPV VMDMGGNIGT QSTTAFARGF TLGHVSTANL WRMVGRELVI
GLVLGVVMGI IGGIAASLWQ GDPSVGLAVG GALALGLPIA TTIGFLIPYG LLKIGVDHVP
ASDPIMTTVK DFTMVTIYFS LAAMLIGIDV A