Gene Hhal_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1300 
Symbol 
ID4710788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1411057 
End bp1411428 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content65% 
IMG OID639855769 
Producthypothetical protein 
Protein accessionYP_001002871 
Protein GI121998084 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC CTTTCGAGTC CCTCAATGTG CTCGGCCAGC CCCTCGCGCC TTGTAGCACT 
CAGCCTTTGA CCGGCTTTTA CCGGGACGGC TGCTGCAATA CTGGTCACGA GGACGTTGGA
ATCCACACGG TCTGCGCCCG GCTGGACGAG GCGTTTCTGA GCTTTACCCG GGAGCAGGGC
AACGACCTGA CGGCCCCCAA TCCGGGCATG GGGTTTCCCG GCCTTCAGCC CGGGGACCGA
TGGTGTCGTT GCGCCGGCCG CTGGATGGAG GCCTACCGCG CGGGAGTGGC TCCGATGGTG
GATCTGCACG CTAAGCATGC CGAGACCCTG GCCGTGATTG ACCTCGATAC GCTGAAGGCC
TACGCGCTCT GA
 
Protein sequence
MSQPFESLNV LGQPLAPCST QPLTGFYRDG CCNTGHEDVG IHTVCARLDE AFLSFTREQG 
NDLTAPNPGM GFPGLQPGDR WCRCAGRWME AYRAGVAPMV DLHAKHAETL AVIDLDTLKA
YAL