| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1125 |
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| Symbol | |
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| ID | 4710089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1222069 |
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| End bp | 1223667 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855597 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001002703 |
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| Protein GI | 121997916 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGAGTCA ATGACCCGGT CACGCAGCGA CGTGTTGCCG TCTGGGATGG CGCCAACATC
CTGTCGACTA CCGACTCCCG CGGACGGATC CGCTATATCA ACGAGGACTT TGTGCGCATC
AGCGGCTACC AGCCGGAAGA GCTGATCGGG CAGCCGCACA ACGTCATCCG CCACCCGGAC
ATGCCCCGGG TGGTCTTCGA GCACATGTGG CAACGCCTGC AGGCCGGGCA GCCGTGGATG
GGAATCATCA AGAATCGCTG CAAGAACGGC GATCACTACT GGGTTCACGC CTACGCAACG
GCCATCCGCG ACGACGCGGG CAACATCACC GAGATCCAGT CGGTACGTCA GCAGATCAAT
GACGAGGCGG TGGTCGCCCG AGCCGAGCGC GCTTACAAGC GCCTGCGCGC CGCCGAACCG
GACAAGGGGG CACTGCCCGC CGGACTGATC GGCCGGCGGG CAGTGGGGAG CGGCGTGTGG
CTCGCCGCCG GGGGGACGGC CGCACTACTC GGCGTCATCC TGGCCGCGCT GCTGCCTATC
GGCACCGGGC TCCAGCTGCT GGTCGGCATC GCCGGCGTCT CCGCCTTCGG CGCAGCCAGC
CTGCCCATGC TGCGCCAACT CCGCGGTGCG CGCGACCAGG CCCGCGCCTT GCTCGACGAC
CCACTCAGCG AGGAGATCTA CCTCGGGCGC CGCGACCACG GCGCCTCGAT CCAGCTGGCC
CTGATCCACC AGGCCTCCGA GACCCAGGCC ATCGCCAAAC GCCTGGGTGA CGACGCCCGT
CAGCTGTCCC AGGAGGCCGC CGGGGCCCGC CAGTCGATGC AGGCGGTACG CGACGAGGCG
CAGCAGCAGA GCGACGAGAC CCGCAGCGTG GCCACCGCCA TGGAACAGAT GAGCTCCACG
GTGCAGGAAG TGGCCCAGAA CGCCTCGGCC ACCGCCGATG CCACCGAGCG GGCTGGCAAG
CAGACCGACC GGGGTCGGCA GACCGTCGAG CAGAGCACCG CTGCGGTGCG CTCACTGGTC
CAGGGCATCG AGAACGCCGC GACCACCATC GAGCGGGTCA ACGGCGAGGC CGAGCGCATC
GGCAAGGCGG CCACGCTCAT CGGCAAGATC ACCAAGCAGA CCCACCTTCT GGCCCTCAAC
GCCTCGGTCG AGTCGGCGCG GGCTGGCGAG GCGGGACGCA GCTTCACCGT CGTGGCCGAG
GAGGTGCGCA AGCTGGCCGG GCAGACCGCG GAATCGACCC GCGAGATCGA TGCCATCATC
GAGTCGCTAC AGAGCGGCTC AGCGGAGGCC GTCGAAGCCA TGCGCGAGAG CCGCAACCGT
GCCGAGCAGA CCCTCGCCCA CGCCGACGAG TCCAGCCAGT CGCTGCAGGA GATCCAGGCC
GCGGTGGACG AGATCCGCGA TATGGCCGGC CAGATCGCCA CCGCCACCGA GCAGCAGGGG
GCCACCTCGC AGGAGATCGC GCGCAGCGTC TCCAGCATCG AGGGGGTGGC CGAACGGGTG
ACCAGCGAGT CGTTGCAAAC CGACCAGCGC CTACAGGCGG TCATCGAGCG CATCGCCGGC
ATCGAGGCCC TGACCGGTCG ATTCGTGCGT CGCCGCTGA
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| Protein sequence | MRVNDPVTQR RVAVWDGANI LSTTDSRGRI RYINEDFVRI SGYQPEELIG QPHNVIRHPD
MPRVVFEHMW QRLQAGQPWM GIIKNRCKNG DHYWVHAYAT AIRDDAGNIT EIQSVRQQIN
DEAVVARAER AYKRLRAAEP DKGALPAGLI GRRAVGSGVW LAAGGTAALL GVILAALLPI
GTGLQLLVGI AGVSAFGAAS LPMLRQLRGA RDQARALLDD PLSEEIYLGR RDHGASIQLA
LIHQASETQA IAKRLGDDAR QLSQEAAGAR QSMQAVRDEA QQQSDETRSV ATAMEQMSST
VQEVAQNASA TADATERAGK QTDRGRQTVE QSTAAVRSLV QGIENAATTI ERVNGEAERI
GKAATLIGKI TKQTHLLALN ASVESARAGE AGRSFTVVAE EVRKLAGQTA ESTREIDAII
ESLQSGSAEA VEAMRESRNR AEQTLAHADE SSQSLQEIQA AVDEIRDMAG QIATATEQQG
ATSQEIARSV SSIEGVAERV TSESLQTDQR LQAVIERIAG IEALTGRFVR RR
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