Gene Hhal_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1123 
Symbol 
ID4710085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1219826 
End bp1220266 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content69% 
IMG OID639855595 
Producthypothetical protein 
Protein accessionYP_001002701 
Protein GI121997914 
COG category[S] Function unknown 
COG ID[COG1833] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGAGG ACGCCACCAC CTACTGCCTG ACACTGTTCG TGACGGAAGC GATGCGGGTC 
GCGGTCGGGC GGCTCGGCGT GGTGGCGATT CCGGCCGGCT GGTGGGTGTA CACGGGCAGC
GCCAGGCGCA ACATGGATGC CCGGATCGCA CGGCACCTGC GCCGGGAGAA GCCGCAGCGC
TGGCACCTGG ATTACCTGAC GAGTGATTCG CGGGTCATTG TGGTTTCGGT CACCCGGCAC
ACCGAGCCGG AGTGTCAGCG CAACCGCCGC AACGGCGGTG TTGTAGTGGT GCCGGGCTTC
GGTGCCAGCG ACTGTGCGGC CGGGTGCGGT AGCCACCTAC GCTGGCTCGG GGCGACACCC
GACCCGATCA CCGCGGGGTC CGCGGGCGCC GCAGTCGGCT GCTCCCTGTA CCCCCTGGAA
CGAGGACACC CATGTACGTA G
 
Protein sequence
MQEDATTYCL TLFVTEAMRV AVGRLGVVAI PAGWWVYTGS ARRNMDARIA RHLRREKPQR 
WHLDYLTSDS RVIVVSVTRH TEPECQRNRR NGGVVVVPGF GASDCAAGCG SHLRWLGATP
DPITAGSAGA AVGCSLYPLE RGHPCT