| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1042 |
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| Symbol | |
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| ID | 4709794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1125586 |
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| End bp | 1127592 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855513 |
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| Product | transketolase |
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| Protein accession | YP_001002620 |
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| Protein GI | 121997833 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCGA CCGAACTGAG CCGACGAGAG CTCGCCAACG GCATTCGCGC CCTGGCCATG
GACGCTGTCC AGAAGGCCAA TTCCGGCCAT CCCGGGGCGC CGATGGGCAT GGCGGATATC
GCCGAGGTGC TGTGGCGGGA CTACCTGCGC CATGCGCCGC AGAGGCCGGG CTGGTTCGAC
CGCGACCGCT TTGTCCTCTC CAATGGCCAC GGTTCGATGT TGCAGTACGC ACTGCTCCAT
CTGAGCGGTT ACGACGTCTC CGTCGACGAC CTCAAGAACT TCCGGCAGCT GCACTCGCGC
ACGCCGGGCC ACCCGGAGTA CGGCTACACC CCCGGCGTCG AGACCACCAC CGGGCCGCTG
GGCCAGGGGT TGGCCAACAG CGTCGGCATG GCGCTGGCCG AGCGGATGCT GGCGGCGCGC
TTCAACCGCC CTGGTCACGA GATCATCGAC CACTACACCT ACGTCTTCAT GGGCGACGGC
TGCCTGATGG AGGGGGTCTC CCACGAGGCC TGCTCGCTGG CCGGCACTCT CGGCCTGGGC
AAGCTGATCG CCTTCTATGA CGACAACAGC ATCTCCATCG ACGGCAACGT CGAGGGCTGG
TACACCGAGG ACGTCCGTCA GCGCTTCGAG GCCTACGGCT GGCAGGTGAT CGGTCCCATC
GACGGCCACG ACGGCGAGGC CGTGCGCCAG GCCATTGAGC AGGCGCGCGC CGACACCAGC
CGTCCCACGC TGATCGACTG CAAGACGGTG ATCGGCTTCG GTGCGCCGAA TCAGTGCGGT
ACCGCCGGCG TGCACGGTGC GCCGCTGGGC GAGGAGGAGA TCGCGGCCTG TCGCAAGGAG
CTCGGCTGGG AGCACGGTCC GTTCGAGATC CCCGACGCGC ACTACCAGGC GTGGGATGGT
CGCGGCCGGG GCGAGGAACT CCTGCAGGCC TGGGGCGAGC GCCTTGAGGC GTACCGCAAG
GAACACCCCG AGCTGGCCGA TGAGCTGGAG CGGCGGATGC GCGGCGAGCT GCCGGGCAAC
TGGCAGGAGC TGGTCGCCGA GGGCCTGGAG AAGTTCGCCG GCGGCAAGAA GGACGCCACT
CGCAAGAGCT CCCAGGCGGT GCTCGGCCAC TTCGGCCCGC ACTTGCCCGA GCTGCTGGGT
GGCTCTGCCG ACCTGACCGG CTCCAACAAC ACCTGGTGGG ACGGCTGCTC GACGGTCAGC
CAAGCGCAGG CCGACGGCAA CTACGTCTTC TACGGTGTCC GCGAGTTCGG GATGACGGCG
ATCATGAACG GCGTCGCCCT GCACGGCGGG TTCATCCCCT ACGGCGGCAC CTTCCTGATC
TTCTCCGACT ACGCGCGCAA CGCTGTGCGC ATGGCCGCGC TGATGAAGCA GCGGGTGGTG
ATGGTCTACA CCCACGACTC CATCGGCCTG GGCGAGGACG GCCCCACCCA CCAGCCGATC
GAACAGCTGG CCAGCCTGCG CCTGATCCCC AACCTGCACG TCTGGCGCCC GTGCGACGCC
CAGGAGACGG CTGCGGCCTG GGCGGCGTCC ATCGCCCGCG AGGACGGCCC GAGCATGCTG
GCGCTGTCGC GCCAGGGCAT GGAGCCGCAG CAGCGCAACG GCGAGCAAGT CCGGTCCATC
TCCCGTGGTG GCTACATCCT CAAGGAGGCC GGTTCCGGCA AGCCCGAACT GGTGATCCTG
GCCACGGGCT CCGAGGTGGA TCTGGCCATG GCGGCCCGCG AGCAGCTCGA GGCCGAGGGG
CGCGCGGTGC GCGTGGTCTC CATGCCGTGT GTCGAGGCGT TCTGTGAGCA GGACGAGGCC
TACCGGCAGC AGGTCCTGCC CGGTGACGTG CCGCGGGTGG CCGTCGAGGC CGGCGCCACC
GGCCTGTGGC AGGGCTGGGT CGGCCAGTGT GGCCTGGTGG TTGGCATCGA CACCTTCGGC
GAATCGGCGC CGGGGCCCGA GCTCTACGAG CACTTCGGCC TGACCGCGGA CAACGTCGCC
ACTGCGGGTC GGCGCGTCCT CGGCTGA
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| Protein sequence | MASTELSRRE LANGIRALAM DAVQKANSGH PGAPMGMADI AEVLWRDYLR HAPQRPGWFD
RDRFVLSNGH GSMLQYALLH LSGYDVSVDD LKNFRQLHSR TPGHPEYGYT PGVETTTGPL
GQGLANSVGM ALAERMLAAR FNRPGHEIID HYTYVFMGDG CLMEGVSHEA CSLAGTLGLG
KLIAFYDDNS ISIDGNVEGW YTEDVRQRFE AYGWQVIGPI DGHDGEAVRQ AIEQARADTS
RPTLIDCKTV IGFGAPNQCG TAGVHGAPLG EEEIAACRKE LGWEHGPFEI PDAHYQAWDG
RGRGEELLQA WGERLEAYRK EHPELADELE RRMRGELPGN WQELVAEGLE KFAGGKKDAT
RKSSQAVLGH FGPHLPELLG GSADLTGSNN TWWDGCSTVS QAQADGNYVF YGVREFGMTA
IMNGVALHGG FIPYGGTFLI FSDYARNAVR MAALMKQRVV MVYTHDSIGL GEDGPTHQPI
EQLASLRLIP NLHVWRPCDA QETAAAWAAS IAREDGPSML ALSRQGMEPQ QRNGEQVRSI
SRGGYILKEA GSGKPELVIL ATGSEVDLAM AAREQLEAEG RAVRVVSMPC VEAFCEQDEA
YRQQVLPGDV PRVAVEAGAT GLWQGWVGQC GLVVGIDTFG ESAPGPELYE HFGLTADNVA
TAGRRVLG
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