| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1006 |
|---|
| Symbol | |
|---|
| ID | 4709582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1077982 |
|---|
| End bp | 1078827 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639855477 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_001002584 |
|---|
| Protein GI | 121997797 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTGG TGCTGCTGGC TACGGTCTCG ATCCTGCTCA TGAGTCTGGA CCACCGCGAG
CACCTCGTCG AGCCGGTCCG CGAGACCGTC TCCGGGGTGG TGTATCCGTT GCGGTTCGTC
GTCGACGCCC CCTTCTCCAT CGCCGAGCGG GTCTCCGAGC GTCTGGCCAC CCGCCACCAG
ATCATGGAGG AGAACCGCCA GCTGCGCGAC CGACACCTGG AGTACCAGGA GCGCCTGCAG
AGGATGCACA GCCTGGAGCG GGAGAACGAG CGCCTCCGCG ATCTGCTCGG CTCCTCGGAG
CGGCTGGAGA CCGAGGTGGC CATCGCCCAG CTGATGCGCG TCGAGCTCGA CCCCCACACC
CACTTGGTGG AGATCGACCG CGGCTCCCGG CAGGGGGTCT TCGTCGGCCA GCCGGTCCTC
GATGCCAACG GGGTCATGGG TCAGGTGGAT CGCGTCGGGG CCCACTCGGC CAGCGTGCGG
CTGATCTCCG ACCCGAGCCA CGCCATCCCG GTGGAGAACA ACCGCAACGG GCTACGCACG
GTCGCGCTGG GCAGCGGCGA CCCGCAGCGC CTGGAACTGG CCAACGTGCC GGGCAACGCG
GACCTCCGCG AGGGCGACCT GCTGACGGCC TCGGGCCTGG GCGGCGCCTT CCCCCGGGGC
TACCCGGTTG CCGAGGTGAC CTCGGTGGAG GTCGAGGCCG GCGAGCCCTT CGCCCGGGTG
ACCGCCCGCC CGGCCGCCGA GCTGGATCGC AGCCGTAAGC TGCTGCTGGT CTCCGTGGCC
GAGAACGCGG ATGATCAGGC CGGGGACGAC GAGGCGGCGG ACAACGAGAG CGAGGACGCG
TCTTGA
|
|---|
| Protein sequence | MRLVLLATVS ILLMSLDHRE HLVEPVRETV SGVVYPLRFV VDAPFSIAER VSERLATRHQ
IMEENRQLRD RHLEYQERLQ RMHSLERENE RLRDLLGSSE RLETEVAIAQ LMRVELDPHT
HLVEIDRGSR QGVFVGQPVL DANGVMGQVD RVGAHSASVR LISDPSHAIP VENNRNGLRT
VALGSGDPQR LELANVPGNA DLREGDLLTA SGLGGAFPRG YPVAEVTSVE VEAGEPFARV
TARPAAELDR SRKLLLVSVA ENADDQAGDD EAADNESEDA S
|
|---|
| |