Gene Hhal_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0966 
Symbol 
ID4709467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1037582 
End bp1038178 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content75% 
IMG OID639855435 
Productchorismate lyase 
Protein accessionYP_001002544 
Protein GI121997757 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0938345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTG ATGGATTCGC AGTGGCAAAC GGGGTGAGGG AACACGCCGC CTGGCAGCCC 
CAGGCAGCAG CCTGGCGGCC CGGGGTGGCC GTGGTCCCGG GCCGGCCCGC GCCGGCGGTG 
CAGCGGTTGC TCACCGAGCG CGGCTCGTTG ACGGCGCGTC TCGAGCGTCT GGGGCCGGTC 
CGCGTCCACG TGCTGCGCGA GGCCTGGCAG CGACCGGCCC CGGATGAGGG GGTCGCCCTC 
GAGCTCCCGG TGGGGCGACA CGCCTGGTTG CGGGAGGTCG TGCTCGACTG CGAGGGTGGT 
CCGACCATCT ACGCCCGCAG CATCGTGCCG GATCGTCTGC TCGGGCCGCT GGCGCGGCTG 
CCGCGGCTGG GCGAGCGCCC CCTGGGCCGA CTGCTCTTCT CGGCGGCCGA TGTGCAGCGT 
GGCCCGCTTG CGGTGGCGCG GCTCAGGGGC CGCGAGCCGC TGGTCCGCTG GCTGCGTGGC 
CACGGCCTGC CATCGCCGGC CGGGGGCTGG GCGCGGCGCT CGACGCTGTC CGTGGCCGGA 
CGGCGGCTGC TGGTAACCGA AGTCTTTTTC CCGGAGGGTG TTGAGGGTGA GCGGTGA
 
Protein sequence
MTGDGFAVAN GVREHAAWQP QAAAWRPGVA VVPGRPAPAV QRLLTERGSL TARLERLGPV 
RVHVLREAWQ RPAPDEGVAL ELPVGRHAWL REVVLDCEGG PTIYARSIVP DRLLGPLARL 
PRLGERPLGR LLFSAADVQR GPLAVARLRG REPLVRWLRG HGLPSPAGGW ARRSTLSVAG 
RRLLVTEVFF PEGVEGER