Gene Hhal_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0939 
Symbol 
ID4709305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp1017028 
End bp1017456 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content74% 
IMG OID639855408 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001002517 
Protein GI121997730 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.193573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGC CGCCCGGCGG CACGCTGCTC GGCTTCGATC CCGGGGCGCG GCATATCGGG 
GTGGCCGTCG GCGAGGCGCT GTTAGGGACG GCCCGCGGCC TGACCACCCT GCCGGCGCGC 
CACGGTCAGC CGGACTGGGA GGCTGTCTCC GAGCTGCTCG CCCAGTGGAC CCCCGAGGCG 
CTGGTGGTGG GACTGCCCAG CCACGCCGAC GGCAGCGATG CCGACAGCAC CGAGTTGGCC 
CGGCGCCTGG CCGGCCGGCT GCACGGGCGC TTCGGCCTGC CGGTGCACAC CGTCGACGAA 
CGCCTCTCCT CCCACGTCGC GGAGGAGCGG CTCGACCCGC GGCAACGCCA GCGCGATCCG 
CACGCGGTAC ACGCCGAGGC GGCCGCGGTC ATCCTCGAGA CCTTCTTTGC CCAGCAAGGG 
GTGGCATGA
 
Protein sequence
MPEPPGGTLL GFDPGARHIG VAVGEALLGT ARGLTTLPAR HGQPDWEAVS ELLAQWTPEA 
LVVGLPSHAD GSDADSTELA RRLAGRLHGR FGLPVHTVDE RLSSHVAEER LDPRQRQRDP 
HAVHAEAAAV ILETFFAQQG VA