Gene Hhal_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0918 
Symbol 
ID4710192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp991969 
End bp992979 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content65% 
IMG OID639855387 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001002496 
Protein GI121997709 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA ACGTAGCGAT CAACGGTTAC GGGCGTATCG GCCGCAATGT CCTGCGCGCG 
CTCTACGAGA GTGGCCGCAC CGACGAGATC CGCATCGTCG CCATCAACGA CCTCGGCGAT 
GCCGAGACCA ACGCCCATCT GACCCGCTAC GACACGGCCC ACGGCCGCTT CCCCGGCGAT 
GTGCAGGTGG AGGGCGGCGA CCTGGTGGTC AACGGTGACC GCATCAAGGT CTGCGCCGAG 
CGCAACCCCG CCGATCTGCC GTGGAAAGAT CTCGGGGTCG ATGTCGTCAT GGAGTGCACC 
GGGCTGTTCA CCACCAAGGA GAAGGCCAGC GCCCACATCC AGGCCGGCGC CAAGAAGGTC 
GTGATCTCCG CCCCCGGCGG CAAGGACGTC GACGGCACCT TCGTCTACGG CGTCAACCAC 
CAGCAGATGA CCTCGGGGCT CGAGGTGGTC TCCAACGCCT CCTGCACCAC CAACTGCCTG 
GCACCCATGG TCAAGGCCAT CCAGGACAAG ATCGGGCTCG AGGGCGGACT GATGACCACG 
GTCCACGCCT ATACCAACGA CCAGGTCCTG ACCGACGTCT ATCATAGCGA CCTGCGCCGC 
GCTCGCAGTG CCACCCATTC CCAGATCCCG ACCAAGACCG GTGCCGCTGC CGCGGTGGGC 
CTGGTACTGC CGGAGCTCAA CGGCAAGCTC GACGGCTTCG CCATCCGCGT GCCGACGATC 
AACGTCTCGC TGGTGGATCT CACCTTCACC GCGTCCCGGG ACACCAGCGT CGAAGAGGTC 
AATGAGGTGG TGAAGGCCGC GGCCCAGGGT GAGTTGGCCG GTGTGCTCGC CTACAACGAG 
GACCCGCTGG TCTCCATCGA CTTCAACCAC AACCCGTCGT CGAGCATCTT CGATGCCACC 
CTCACCCGCG CCATGGGCAG CCGCCTGATC AAGGCCTGCG CCTGGTACGA CAACGAGTGG 
GGCTTCTCCA ACCGCATGCT CGACACCACC GTGGCGCTGA TGCGCGCCTG A
 
Protein sequence
MTINVAINGY GRIGRNVLRA LYESGRTDEI RIVAINDLGD AETNAHLTRY DTAHGRFPGD 
VQVEGGDLVV NGDRIKVCAE RNPADLPWKD LGVDVVMECT GLFTTKEKAS AHIQAGAKKV 
VISAPGGKDV DGTFVYGVNH QQMTSGLEVV SNASCTTNCL APMVKAIQDK IGLEGGLMTT 
VHAYTNDQVL TDVYHSDLRR ARSATHSQIP TKTGAAAAVG LVLPELNGKL DGFAIRVPTI 
NVSLVDLTFT ASRDTSVEEV NEVVKAAAQG ELAGVLAYNE DPLVSIDFNH NPSSSIFDAT 
LTRAMGSRLI KACAWYDNEW GFSNRMLDTT VALMRA