Gene Hhal_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0870 
Symbol 
ID4710817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp943520 
End bp944053 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID639855329 
ProductNusG antitermination factor 
Protein accessionYP_001002448 
Protein GI121997661 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGC GCTGGTACGT AATCCACGCC TATTCGGGCT TCGAGAAGCA GGTTCAGCGT 
TCCCTTCAGG AGCGCATCCG GCGCGCTGGC ATGGAAGACA AGTTCGGCGA GATCCTCGTG
CCCACCGAGG AGGTCGTCGA GATGCGCGAG GGGCAGAAGC GCAAGAGCGA GCGCAAGTTC
TTCCCCGGCT ACGTCCTCGT GCAGATGGAG CTCGACGACG ATACCTGGCA CCTGGTCAAA
GAGGTCCCGC GGGTGATGGG GTTCATCGGT GGTCGTCCGG ACCGCCCGGC TCCCATCTCG
GATCGCGAGG CCGAGCAGAT CCTCAGCCGG GTCCGCGAGG GCGCCGAGAA GCCGCGGCCC
AAGGTCCTGT TTGAGGTCGG TGAGATCGTG CGGGTCACCG ACGGCCCGTT TACCGACTTC
AACGGCGCGG TGGAAGAGGT CAACTACGAG AAGAGCCGTC TGCGCGTGGC AGTGCTCATC
TTCGGCCGCT CCACGCCCGT CGAGCTCGAG TTCAGCCAGG TCGAAAAAAC GTAA
 
Protein sequence
MALRWYVIHA YSGFEKQVQR SLQERIRRAG MEDKFGEILV PTEEVVEMRE GQKRKSERKF 
FPGYVLVQME LDDDTWHLVK EVPRVMGFIG GRPDRPAPIS DREAEQILSR VREGAEKPRP
KVLFEVGEIV RVTDGPFTDF NGAVEEVNYE KSRLRVAVLI FGRSTPVELE FSQVEKT