Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0818 |
Symbol | |
ID | 4709156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 900262 |
End bp | 900795 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639855277 |
Product | hypothetical protein |
Protein accession | YP_001002396 |
Protein GI | 121997609 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.676799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCCGC GGGCGGCGCC AGACCGCGGT CTCCGCCCCG GCCCGGCGGT ATGGCTCGGG CGCTTCCTGC GGGCAGCGGC GGTCCTGCTG CTGCTGTGGC TGATCCTCGC CGAGGGCGCC TTCGGCGGTG TCCTCGGCGC GGCTACGGTG CTCGCCGCCG CCGGGGTGGG CGTCTACTTC GCCGGCCGCC GCATCCACCC CTGGTACCCC CTGCCGGCGC TGCGCTTCGC CGGCTTCTTC CTGGTCCGCT CGCTGATCGG TGCCGTGGAC GTCGGCTACC GCGCCGTCCA CCCGCGCATG CCCATCCACT GCCACTGGCT GCGTTACGCC GTCAGCCTGC CCGGCGGTGA GCCCCGGGTC GCCCTGGTGG CGGCGGTGAG CCTGCTGCCC GGCACCTTGG CCGCGGATCT GCGCGGCGAT ATCCTCGTCG TCCACGCCAT CACCCCGCAG GCCGAGGACG AGGTGGCGGC GCTGGAGCGC CGCGTCGCCG CGGTCTACGG TCTCAGTGGG ACCGCCTCCG GTGCCGCCGC ATGA
|
Protein sequence | MAPRAAPDRG LRPGPAVWLG RFLRAAAVLL LLWLILAEGA FGGVLGAATV LAAAGVGVYF AGRRIHPWYP LPALRFAGFF LVRSLIGAVD VGYRAVHPRM PIHCHWLRYA VSLPGGEPRV ALVAAVSLLP GTLAADLRGD ILVVHAITPQ AEDEVAALER RVAAVYGLSG TASGAAA
|
| |