| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0768 |
|---|
| Symbol | |
|---|
| ID | 4710684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 850711 |
|---|
| End bp | 851769 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639855229 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001002348 |
|---|
| Protein GI | 121997561 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGC AGATTGTCGC CGTTGACTTG GCAAAGAACG TCTTCGAGGT TGCCGTCGCG
GACGGGCTGG GGACGAAGCC GCAGCACCGT CGCCTGAGCC GTGGGCAGTT CGAGCGTTTC
ATCGGGGAGC AGCCGCCAAG TGTCTTCGTC CTCGAGGGCT GCGGTATGGC GCACCACTGG
GGCCGGAGAC TCGGTGCTCA GGGACACGAG GTCCGGCTAC TCCCTGCTCA GTACGTTGCC
AGCTATCGGC GGCGAAACAA GACGGACCGC GCGGATACGC TTGCACTGCT TGAGGCGCAC
CGCGCCCCGG ACATTCACGC AATCCGGGTC AAGAGCGCGG AGCAGCAAGC CGTGCAGCAA
CTCCACCGCG TCCGCGAGCA GTTGATCCGA AATCGCACGG CGTGGATCAA CCAGGCACGG
GGGCTGCTGC GCGAGCACGG GGTGACCCTA CCCCAAGGCG CCCACGCGGC ACGGCGTCGA
ACCCCCGGGG TGCTTGAGGA TGCAGAGCAA CCCGTGCCGG ACAAGATCCG CCAGATACTG
CACAACCTTA TTGAAAACAT TCAGCGCATG GATGACCAAG TCGCCGACAT CGACGCGCAG
CTGCAGGCCA CTCAGCGCGA GGATCAGGAT GCGGCCCGCA TCAGTCAACT TCCGGGTATC
GGGGCGATCA CGAGCACCGC GCTGGTCAGC GCGGTCGGCG ACCTGCGCCA GTTCATTAGT
GCCCGGCAGT TCCCGGGTTG GCTCGGGCTC ACTCCGAAGG AATACAGCAG CGGTTCGCGC
AGGTGCCTGG GTGGAATCAC CCGCAGCGGC GACCCGTACG TACGGAAACA GCTGATTCAT
GGGGCTCGAT CAGCGCTGTA CCGAATGCGC CGACGAGCCG CACAGCAAGC GGAACTCACG
CCATTGGAGG CGTGGGCGAT GAACACCGAG GCGCGGATCG GTCGCAACAA GGCGACGATT
GCGCTGGCCA ACAAGCTGGC CCGGCGCGCT TACGCCCTGT GTCGGGATCA AGGCACGTAT
GCGCCGTTCG ATCACCCGGC ACCGGCTCAC GCCGCCTGA
|
|---|
| Protein sequence | MPQQIVAVDL AKNVFEVAVA DGLGTKPQHR RLSRGQFERF IGEQPPSVFV LEGCGMAHHW
GRRLGAQGHE VRLLPAQYVA SYRRRNKTDR ADTLALLEAH RAPDIHAIRV KSAEQQAVQQ
LHRVREQLIR NRTAWINQAR GLLREHGVTL PQGAHAARRR TPGVLEDAEQ PVPDKIRQIL
HNLIENIQRM DDQVADIDAQ LQATQREDQD AARISQLPGI GAITSTALVS AVGDLRQFIS
ARQFPGWLGL TPKEYSSGSR RCLGGITRSG DPYVRKQLIH GARSALYRMR RRAAQQAELT
PLEAWAMNTE ARIGRNKATI ALANKLARRA YALCRDQGTY APFDHPAPAH AA
|
|---|
| |