Gene Hhal_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0642 
Symbol 
ID4709304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp719387 
End bp720382 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID639855105 
Producthypothetical protein 
Protein accessionYP_001002228 
Protein GI121997441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC GCGGCCTGAC CGAGAAGGTC CGTCAGGGTC TGTGGCAGGG GCACTACGGC 
AACCGGGAGC AGTCCCTGGA CCGACCGGGT GACCCGGTCA CGGTGACCCA GATGGTGCTT
TCCATCGACC AGGTGGTTGA GTACGAGGAC AACCCGCGCC GCCTGGAGAA TCCCCGTTAC
GAGGAGATTA AGCAGTCGAT TGCTGCGCAG CGCGGGCTCA ACAACAGCCT GGATGTGACC
CGCCGGCCAG GGGATGAGCA TTACATCACC TGTGCCGGCG GCAATACCCG TTTACGCATT
CTGCGTGAGC TCTACGCCGA AACGGGGGAT GAGGCTTTCG CGCGGATCTA CTGCCTCTAC
CACCCCTGGC AGGGTGAGAC CACCGTTCTA ACCAGCCACC TGGTCGAGAA CGAGCTTCGA
GGCGAGCTCG CGCTGATCGA TAAGGCCCTT GCGCTGGAGC ACCTCCGGAG GCATCTGGAA
TCCGAAGTGG GGGAGCGTCT CAGCCGGAAT GCCTTCATTA CCCGGCTCCA TGCCCTTGGT
TACACGATCA GTAAGCGTCA ACTGCTCCGG TACGAGTTTG CGGCGCAACA CCTGCTGGCC
GCGATTCCAG AGGCGCTGAA CAGTCTCGGG GCCAGAACGC TCGACTACCT GAGGAGGATC
CACGACGCGG CCTGCCAGGT CTGGCACCAC TATCAGCGGG ACGCTGAGGA TTTCGACATC
CTCTGGGAGC AGGCTCTGGC CAATACGGAT GCCGCCGAGT GGGACCCCGA GGAGGGTCGG
GAGGAGCTTG CGGCCCGGAT GGCGGAAGCG CTCGGCATCG ACCGCCGTGC CGTGCGTTAC
GAAATGGACA CAGTCCTGAG TGGCCACCCG CTCCCAAAAC GCGCCGACCA CATGGCGGAT
CAGCCCGCTT CAGTACTGGG AATGGAGGGC GCTACCCCGG AGGAGAGCAC CTCGGCAGAC
GCTGGGGGGG GTAGAGAGAT CGTCCCCCAA GGATAG
 
Protein sequence
MAKRGLTEKV RQGLWQGHYG NREQSLDRPG DPVTVTQMVL SIDQVVEYED NPRRLENPRY 
EEIKQSIAAQ RGLNNSLDVT RRPGDEHYIT CAGGNTRLRI LRELYAETGD EAFARIYCLY
HPWQGETTVL TSHLVENELR GELALIDKAL ALEHLRRHLE SEVGERLSRN AFITRLHALG
YTISKRQLLR YEFAAQHLLA AIPEALNSLG ARTLDYLRRI HDAACQVWHH YQRDAEDFDI
LWEQALANTD AAEWDPEEGR EELAARMAEA LGIDRRAVRY EMDTVLSGHP LPKRADHMAD
QPASVLGMEG ATPEESTSAD AGGGREIVPQ G