Gene Hhal_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0639 
Symbol 
ID4709664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp717264 
End bp718244 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content66% 
IMG OID639855102 
Producthypothetical protein 
Protein accessionYP_001002225 
Protein GI121997438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCA TCAAGCTCAG CCAGGAAGAA CTGGAGGCCC TGGCCGGCCT CCCCAGCCTG 
GCGCTGCGTG TCTATATCCT GGGCATCCGT CCGCACATGG ACTACAGCAC GGGCCTGGTT
GGCGCGCAGC GTCGCATCAG CTGGCAGTCG TTGCGGGAAG CGAGCTATGT CGAGCCGCAC
CAAGGGCTCA CAGACACCGG CACCCCGAGC AAGTCGTCCG TGCGGCGTGC CGTCGACTGG
CTCATCCGGT CGGGATTGGC CATCGATTGT ACGCAGGGCA AGCGCCTGAT CTTCTACTGT
CCGCTGGCGC AGACGGATTC TTCTTCCCAG GAAAAACCCG GCACAAACCC GACACAATCC
CGGCACGATC ATCCCGGCAC GCATGCCGAC ACGACTGAAT CCGCTCATGG CGGGATGTGG
ACGGGGGATC TCGGCACGGA AACCGGCATA AAGCCGGCAC GCCCTGACGA GCCTCATCCC
GGCACACCTC CGGTCTCCGG TGTCCGGAAG AGAGCCCCAT CACACACCGC GGACGGTTCC
AGGTTAGAGG GCGCACCGGT GTGTGACGCG GAGTGTGCGG ACGCCGGCAA GGCCCCCGTG
CAGCAGAGCG GGCAGGGGCC GTCGTCGGCC ACGACCGATA GCCGCGCCAT CTTCGAGCGC
TTCTGGGCGG CCTACCCGAG GAAGGTCAAG CAGAGCGAGG CCTACCAGAT TTTCCGCAAG
CGGGGACTGT GGTGGCGCAT CGACACCATC CTCAGCGATA TCGAACGTCG ACAGCGTGAG
GACCGGCGCT GGCGCGCGGG GTATATCCCC AACCCGGGGA ATTACCTGAA AGACGAGCGC
TGGCTCGAGT CCATCGAGCG CGGCCGGCAA GTCGGCGGGG CCGGCCCGGC CGCTCCCAAC
ACGCAGTCAT TGGAGAAGAG CTACCAAGCC GAGGCCGAGA AGTTCGCAGC CGCCGGTTTC
GAAACGGACC CCGACTGGTA G
 
Protein sequence
MSAIKLSQEE LEALAGLPSL ALRVYILGIR PHMDYSTGLV GAQRRISWQS LREASYVEPH 
QGLTDTGTPS KSSVRRAVDW LIRSGLAIDC TQGKRLIFYC PLAQTDSSSQ EKPGTNPTQS
RHDHPGTHAD TTESAHGGMW TGDLGTETGI KPARPDEPHP GTPPVSGVRK RAPSHTADGS
RLEGAPVCDA ECADAGKAPV QQSGQGPSSA TTDSRAIFER FWAAYPRKVK QSEAYQIFRK
RGLWWRIDTI LSDIERRQRE DRRWRAGYIP NPGNYLKDER WLESIERGRQ VGGAGPAAPN
TQSLEKSYQA EAEKFAAAGF ETDPDW