| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0626 |
|---|
| Symbol | |
|---|
| ID | 4709380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 702746 |
|---|
| End bp | 703816 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639855090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001002213 |
|---|
| Protein GI | 121997426 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1367] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR01894] CRISPR-associated RAMP protein, Cmr1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.485642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGGC AAGCTTGCAG GCATGCTGAC CACGTTGATC GCCGGGCGAT ACTGCGGCCA
CGCAAGAGAG CGAAGAGCAC CATGGAGCAA CGACACCTGA CCCTGGAGCT GCTGACCCCG
ACCTTTCTCG GGGATGCTCA GCAGACCGCC GCCTGGCGGA CGCCGCCAAT CAAGGCGCAG
CTGCGCCGCT GGTGGCGGGT CGCCGCGTTC GCGCAGGGGA TGCGCCTACC CGAGCTACGC
GCCCTGGAAG GACGGCTTTT CGGCGACGCC GCCGGGCAGC AGGGCCGCAA GAGCCAGGTT
CGGCTGCGCC TACAGCCGCA TAAGGGACGG CCGGGCACGC AGCACAACAA CGCGTGGCGC
CAGCAAGCCA ATCAACAGCC GTTACGGATG AATAACGGCT TGCCGGCCGA TGGCTACCTC
GGTTTCGGCC GGGTCAAGAC CAAAGGTGCT AACGAGACCG CCCTGCCACC CGAGGAGAAG
GCCGAGCTGC GCCTGGCCTG GCCGGCGGAA GCCGAGGGCG CCGAGGCCCT CGACGAGGCC
CTCGGGCTCT TCCATCGGCT CGGCAGCCTC GGAGGACGCA GCCGCAACGG CTGGGGCGCC
TGCCACCTGC ACGGCGCCGA GGCCATTGGC CTGGACGCCT ACAGCCGTCC CTGGGAAGAG
GCCTTGGAAG AGGCCTGGAT CCACGCCCTC GGCAGGGATG GAAACGGCCT GCTGCTGTGG
TGGACCCCGC CGTGCAAGAG CTGGGAGGCC GCCATGCGAC GGCTCGGCGA CCTGCGCAAG
GGCCTGTGCG GCGAGGCGGG GGCGCTGCGG CCGCTGCTCT CCTGGCCGGT CACAGGCCAG
CAGCAGCAGG GTCTCGACAA CCAGAACCGG ATCCCCAACA CCCTGCAGCT TAAGGTTGTC
CGGGACGAGC AGGGGCAGCT GCGGGGACAA CTCGCGCACC TCCCCTGCCG ACCCGAGCCG
AAGATCTGGG ATGCGCTACC CAAGGAGGTG CGCGACGACC ATCCTGCGCT CTGGCGCAAC
GCCCACGCCT TCCTCGACCG GCACAGCGAT CTCGAGCGGG TGCACGCATG A
|
|---|
| Protein sequence | MSRQACRHAD HVDRRAILRP RKRAKSTMEQ RHLTLELLTP TFLGDAQQTA AWRTPPIKAQ
LRRWWRVAAF AQGMRLPELR ALEGRLFGDA AGQQGRKSQV RLRLQPHKGR PGTQHNNAWR
QQANQQPLRM NNGLPADGYL GFGRVKTKGA NETALPPEEK AELRLAWPAE AEGAEALDEA
LGLFHRLGSL GGRSRNGWGA CHLHGAEAIG LDAYSRPWEE ALEEAWIHAL GRDGNGLLLW
WTPPCKSWEA AMRRLGDLRK GLCGEAGALR PLLSWPVTGQ QQQGLDNQNR IPNTLQLKVV
RDEQGQLRGQ LAHLPCRPEP KIWDALPKEV RDDHPALWRN AHAFLDRHSD LERVHA
|
|---|
| |