| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0595 |
|---|
| Symbol | |
|---|
| ID | 4711166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 670764 |
|---|
| End bp | 671807 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639855053 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001002183 |
|---|
| Protein GI | 121997396 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.753912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCCGT CCCTGTCGCC GATCAATCAG CGTCGCCTGG CCCGGTTCCG TGCCAACCGT
CGCGGTTGGT GGGCACTGTG GATCTTTGTC GGGCTGTTTG TGGTCAGCCT GTTCGCCGAG
CTCATCGCCA ACGACCGGCC ACTGGTGGTC TGGTTCGAGG GCAGCCTGTA CTTCCCGGTG
GTCGAGTCGA TCCCGGAGAC GGAGTTCGGC GGCGAGCTGC CCACGGAGGC GGTCTACCGG
GACCCGCACG TGCAGGGGCT GATCGATGCC GGGGGCTGGG CGCTGTGGCC CCCCATCCGC
TACAGCTACG ATACCGTGCA CTACGGCCTG CCGGAGCCAG CCCCGGCGCC GCCCTCGGCG
GAGAACTGGC TGGGGACCGA CGATATGGGT CGGGATGTGT CGGCGCGCAT CCTCTACGGG
TTCCGGATCT CGGTGGTCTT CGCACTGCTG CTGACCGTGG CCAGCTCGGT GATCGGCGTG
GTGGTGGCCG CGCTGCAGGG GTATTTCGGC GGTAAGACGG ATCTCTTTGG TCAGCGGATC
GTCGAGATCT GGTCGGGCCT GCCGGCGCTC TACATCATCA TCATCGCCTC GGCGCTGATC
GAGCCCAGCT TCTGGTGGCT GCTGTTCATC CTGCTGCTGT TCCAGTGGGT CAGCCTGGTG
GGGGTGGTGC GCGCCGAGGT GCTGCGTGCG CGGAATCTGG AGTACGTCAA GGCGGCCCGG
GCGCTGGGGG CAGGGCACCT GCGGGTGCTG TTCCGCCATG TGCTGCCCAA CGCCATGGTG
GCCACGCTGA CCTTCCTGCC GTTCATCATG AACGGCTCGA TCACCACGCT GACCTCGCTG
GACTTCCTCG GCTTCGGCCT CCCCCCGGGG TCGCCGTCGC TGGGGGAGCT GCTGCAGCAG
GGCAAGGACA ATCTGCACGC GCCCTGGCTG GGCATCTCGG CCTTTCTCAG CCTGGCGCTG
TTGCTGTCGC TGCTGATCTT CGTCGGCGAG GCGGCCCGCG ACGCCTTCGA TCCGCGCAAG
GCGCAGGGGG GCGACCGTGG TTGA
|
|---|
| Protein sequence | MGPSLSPINQ RRLARFRANR RGWWALWIFV GLFVVSLFAE LIANDRPLVV WFEGSLYFPV
VESIPETEFG GELPTEAVYR DPHVQGLIDA GGWALWPPIR YSYDTVHYGL PEPAPAPPSA
ENWLGTDDMG RDVSARILYG FRISVVFALL LTVASSVIGV VVAALQGYFG GKTDLFGQRI
VEIWSGLPAL YIIIIASALI EPSFWWLLFI LLLFQWVSLV GVVRAEVLRA RNLEYVKAAR
ALGAGHLRVL FRHVLPNAMV ATLTFLPFIM NGSITTLTSL DFLGFGLPPG SPSLGELLQQ
GKDNLHAPWL GISAFLSLAL LLSLLIFVGE AARDAFDPRK AQGGDRG
|
|---|
| |