| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0579 |
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| Symbol | |
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| ID | 4709943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 656794 |
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| End bp | 657570 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855037 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001002167 |
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| Protein GI | 121997380 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGAAC AAGCGTTGAT CTCCGCCGAC TACCAGCCCG CCCAAGACGC CTTTGACGGG
CGCGTCATCC TGGTTACCGG CGCCACCGGC GGCATCGGCA GCGCCGTCTG CCGCCGCCTC
GCCGCCGCCG GTGCGACCTT GGTCATCCTC GATAAGGACC TCAAGGCCCT CGAGGCCCTC
TACGACCGCA TCGTCGAGGA CAACCACCCG GAGCCGGCGA TCTACCCGAT GAACCTCGAA
GGCGCCACCT TCGACAACTT CCCCGAGGTC GCACAACGCA TCCGGGAAGG GCTCGGGCGC
CTCGACGGCC TCCTCCACGC CGCGGCGACC ATGGGCAAGC CCGCCCCCAT CGAGCTCTAC
GACATGGAGA CCTGGTACAA GACCCTGCAG GTCAACCTCA ACGCCGCCTT CATGCTCACC
CAGGCGTGCC TGCCCCTGCT GCGCGAGTCC GACCAGGGCA GCATCCTCTT CACCAGCGAC
GCCAGCGGCC GCAATGGGCG CAAGGCTTAC GGCGGCGCCT ACGCCGTCGC CAACGCCGGG
CTCGAGGGTC TGATGCGGGT GCTCGCGGCC GAGCTGGCCG AAAACACCAG CGTCTGCGTC
AACACCCTCG ACCCGGGCAT CGTCGCCACC GGCTTGCGGC AGAAGGAGTT CCCGTTCGAG
AACCCGCTGG AACTCACCCA GCCCCAGCAG GTGGCCGGGG CCTTCCTGCG CCTGCTCGGC
CCCGACGGGC GGGATTGCCA CGGCCAGGCC TTGAGCGTCG AGCCCGCGCA GGCGTGA
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| Protein sequence | MAEQALISAD YQPAQDAFDG RVILVTGATG GIGSAVCRRL AAAGATLVIL DKDLKALEAL
YDRIVEDNHP EPAIYPMNLE GATFDNFPEV AQRIREGLGR LDGLLHAAAT MGKPAPIELY
DMETWYKTLQ VNLNAAFMLT QACLPLLRES DQGSILFTSD ASGRNGRKAY GGAYAVANAG
LEGLMRVLAA ELAENTSVCV NTLDPGIVAT GLRQKEFPFE NPLELTQPQQ VAGAFLRLLG
PDGRDCHGQA LSVEPAQA
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