| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0556 |
|---|
| Symbol | |
|---|
| ID | 4710564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 631977 |
|---|
| End bp | 632948 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639855014 |
|---|
| Product | cysteine synthases |
|---|
| Protein accession | YP_001002144 |
|---|
| Protein GI | 121997357 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.523099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGC CCGCGCCCGA AGGCGGGCGG ATCTACGACG ACTTCGTGGC CACCATCGGC
GAGACCCCGC TGGTGCGGCT GTCGCGCCTG GGTGCCGAAG CCGGTTTGGC CGCAGAGCTG
CTGGCCAAGC TGGAGATGTT CAATCCGCTG AGTTCGGTGA AGGATCGCAT CGCCCTGGCG
ATGATCGAGG CCGCGGAAGC GGAGGGACGC ATCACGCCGG GGCGCTCGAC GCTCATCGAG
CCTACCTCGG GGAACACCGG CATTGGCCTG GCCTTCATCG CCGCGGCCCG TGGGTACCGG
TTGATCCTCA CCATGCCGGC GAACATGTCC GCCGAGCGTC GCAAGCTGTT TGCCTTCTAC
GGTGCCCGGG TGGAACTGAC CGACCCGGCG GCGGGCATGC GCGGCGCCAT CGACCGGGCC
GAGGCTCTGC TCGAGGAGAT CCCGGATAGC TTCACGCCGG CGCAATTCAG CAATCCGGCC
AATCCCCGCG CACACCGCCT GCGTACCGCG GAGGAGATCT GGCGCGATAC CGGCGGGTCG
GTGGACGGTC TGATCGCCGG GGTGGGGACC GGCGGGACCC TGACCGGGAT CGCCGGGGTG
CTCAAGGAGC GCCGGCCCGG TTTCCGCGCC TACGCCGTGG AGCCGGCCGG GTCGCCGGTG
CTCTCCGGTG GGGCGCCGGG GCCCCACGGT CTGCAGGGCA TCGGTGCCGG CTTTCTGCCG
GATACCCTGG ATGCCACCCT GGTCGATGAG ACCCTGCAGG TGACGGACGA CGAGGCGCTG
GCCATGAGCC GTCGGGTGGC GAGGCTGGAA GGGATCCCGT GCGGAATCTC CAGTGGGGCG
GCGCTGTCGG CGGCGGTCCA GGTGGCCGCC CGGCCGGAGC TGGCCGGACA GCGTCTGGTG
GTCATCCTCG CCTCTGGCGC CGAGCGCTAT CTATCCACAC CCCTGTTCGA GGGGCTGGAC
GACGAGGCTT AG
|
|---|
| Protein sequence | MEAPAPEGGR IYDDFVATIG ETPLVRLSRL GAEAGLAAEL LAKLEMFNPL SSVKDRIALA
MIEAAEAEGR ITPGRSTLIE PTSGNTGIGL AFIAAARGYR LILTMPANMS AERRKLFAFY
GARVELTDPA AGMRGAIDRA EALLEEIPDS FTPAQFSNPA NPRAHRLRTA EEIWRDTGGS
VDGLIAGVGT GGTLTGIAGV LKERRPGFRA YAVEPAGSPV LSGGAPGPHG LQGIGAGFLP
DTLDATLVDE TLQVTDDEAL AMSRRVARLE GIPCGISSGA ALSAAVQVAA RPELAGQRLV
VILASGAERY LSTPLFEGLD DEA
|
|---|
| |