Gene Hhal_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0527 
Symbol 
ID4710604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp596906 
End bp597259 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content65% 
IMG OID639854985 
Productribosomal protein L19 
Protein accessionYP_001002116 
Protein GI121997329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCA TCGACGAACT GGAGCGCGAG CAGATCGAGA CGTGCAAGCA CACGGTGCCG 
GAGTTCGCCC CGGGCGACAC CGTGCTGGTG CAGGTGTGGG TGCGTGAGGG CGGTCGCGAG
CGCGTCCAGC CCTTCGAGGG CGTGGTCATC GCCAAGCGCA AGCGAGGCCT GAACTCCTCG
TTCACCCTGC GCAAGACGTC CCACGGCGAG GGTGTGGAGC GCGTCTTTCA GACCTACAGC
CCGCAGATCG AGAGCATCAA GGTCAAGCGT CGCGGCGACG TGCGCCAGGC CAAGCTCTAC
CACCTGCGCG AGCTCAGCGG CAAGGCGGCG CGCATCAAAG AGAAGATCAA CTAA
 
Protein sequence
MNVIDELERE QIETCKHTVP EFAPGDTVLV QVWVREGGRE RVQPFEGVVI AKRKRGLNSS 
FTLRKTSHGE GVERVFQTYS PQIESIKVKR RGDVRQAKLY HLRELSGKAA RIKEKIN