Gene Hhal_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0469 
Symbol 
ID4711536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp537033 
End bp538313 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content67% 
IMG OID639854928 
Producthypothetical protein 
Protein accessionYP_001002059 
Protein GI121997272 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.272499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGCGA TCCCCGTCAG CCTACTCTTC GCCACCCTCG GCGGTCTGAT CATCCTCTCC 
GGCTGCTTCT CCGGCTCGGA GACGGCGCTG ATGTCGCTCA ACCGCTACCG CATGCGCCAC
CTGGCCAAAC AGGGGCACCG CGGGGCGCGC ATCGCCGAGC GGCTGCTGCA GCGTCCGGAC
CGGGTGCTCG GGGTGATCCT GCTCGGCAAC AACTTCGTCA ACATCGCCGC CTCGTCCCTG
GCGACGCTGA TCGCCCTGCG CCTCTACGGC GAGAGTGCGA TCGCCGTAGC CGCCGGGCTG
CTGACACTGG TGATCCTGAT CTTCGCCGAG GTGGCCCCCA AGACCCTGGC CGCGGTCCAT
CCGGAGCGCG TCGCGTTCCC GGCCAGCTAC GTCCTGTGGC TGCTCCTGCG CTTGCTCTAT
CCGCTGGTCT GGCTGGTGAA TACGGCGGCC AACGCCCTGC TGAGCATCAT CCGGGTGCGG
GTGGAAGACG TCAGCGCCGC AGAACTCAGC CAGGACGAGC TACGCACAGT GGTCAATGAG
GCCGGCGACA TGATCCCCCG TCGCCACCGG CACATGCTGG TGAGCATCCT CGATCTGGAG
GAGGCGACGG TGGAGGACAT CATGATCCCG CGCACGGAGA TCGTCGGCAT CGACCTCGAC
GACCCGTGGT CAGAGACACT GGAGCGGCTG ACCAACAGTC AGTACACCCG CATGCCGGTC
TACCGGGGGA CGGTGGACCA CGTCATGGGG TTCGTGCATG TACGGCGGAT CGTGGGTGAC
CTGGTCCGCG GCAACTTCAC CCCGGAGGAT CTCCAGGCGC GGTTGAAGGA GCCGTTCTTC
ATCCCGGAAG GGACCGGGCT GCACACCCAG CTGCTGAAGT TCCAGCGCCA GCGTGAGCGG
GTCGGCCTGG TGGTGGACGA GTACGGCGAG ATCCTGGGCC TGGCCGCTCT GGACGACATC
CTGGAGGAGA TCGTCGGCGA GTTCACGACG GACCCGGGCA CCCTGACCCG TTCGATCAAC
CGGCAGGATG ACGGGACCTA TCTGGTCGAG GGCAGCGCGA CGGTCCGGGA GCTGAATCGG
GTCCTGGGCT GGGAGTTGGA GACCAGCGGA CCGAAGACCC TCAACGGGCT GATCCTGGAG
CGGCTGGAAA CCATCCCCGA GGCGGGCACG AGCCTGCTCA TCGACGGCTA TCCGGTGACC
ATCGTGCAGA CCCAGGGCAA TCGGGTGAAG ACCGCGGAGA TCCAGCCGGA GCGCCCCCCG
TCCGTCCAGC GGCCGGGGTG A
 
Protein sequence
MEAIPVSLLF ATLGGLIILS GCFSGSETAL MSLNRYRMRH LAKQGHRGAR IAERLLQRPD 
RVLGVILLGN NFVNIAASSL ATLIALRLYG ESAIAVAAGL LTLVILIFAE VAPKTLAAVH
PERVAFPASY VLWLLLRLLY PLVWLVNTAA NALLSIIRVR VEDVSAAELS QDELRTVVNE
AGDMIPRRHR HMLVSILDLE EATVEDIMIP RTEIVGIDLD DPWSETLERL TNSQYTRMPV
YRGTVDHVMG FVHVRRIVGD LVRGNFTPED LQARLKEPFF IPEGTGLHTQ LLKFQRQRER
VGLVVDEYGE ILGLAALDDI LEEIVGEFTT DPGTLTRSIN RQDDGTYLVE GSATVRELNR
VLGWELETSG PKTLNGLILE RLETIPEAGT SLLIDGYPVT IVQTQGNRVK TAEIQPERPP
SVQRPG