Gene Hhal_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0464 
Symbol 
ID4711511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp533415 
End bp533807 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content72% 
IMG OID639854923 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001002054 
Protein GI121997267 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG GTTCGGCATC GGTGCGCCTG GATCGGTGGT TGTGGGCGGC GCGGTTCTTC 
AAGACCCGCC GTCTGGCCGT CGAGGCGGTG CAGGGCGGCA AGGTCGACGT CGGCGGCGGC
AAGGCCAAGC CGAGCCGGGC GGTGCGCCCT GGGGATCGGC TGACCATTAC CAAGGCGCAG
CAGCGCTTCG AGGTGATCGT CCGCGATGTG GCCGAGGAGC GTGGCCCTGC CAAGGTGGCC
GAGACCCTCT ACGAGGAGAC CGAAGCCAGC CGCCAGCGGC GTCAGCAGCA GGCCGAGCAG
CGCCGTGCGG CCGCCGCGTC CATGCCGCGG CCCAGCCATC GCCCCGACCG GCGTGAGCGG
CGCCGCCTGT CGGCCTTCAA GAAGGGCGGT TAG
 
Protein sequence
MSDGSASVRL DRWLWAARFF KTRRLAVEAV QGGKVDVGGG KAKPSRAVRP GDRLTITKAQ 
QRFEVIVRDV AEERGPAKVA ETLYEETEAS RQRRQQQAEQ RRAAAASMPR PSHRPDRRER
RRLSAFKKGG