| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0450 |
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| Symbol | |
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| ID | 4711555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 515808 |
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| End bp | 517091 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854909 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001002040 |
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| Protein GI | 121997253 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.402822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGC TGGTCATCAC CGTCATGCTC ATCCTGCTGC TGCTCGGCTT CCCACTGATG
GTGCCGCTGC TCGCCGGGGC CCTGCTGATC CTCATCGTCG AGCTGCCGTT CATCGGGGCC
GACGCCCTTG TCCGGCAGAT GATCACCGGC ATCCAGCCGG TCGTGCTCTC GGCGGTGCCG
CTGTTCATCC TCGCCGCCGA CATCATGACC CGCGGGCGCA CGGCCAACAC CCTGCTCGAT
CTGGTGGCAA CCGCCATCGG CCACATCCGT GGTGGCCTGC CGATCACCAC GGCCGTGAGC
TGCGCGCTGT TCGGCGCCGT CTCCGGCTCG ACCCAGGCCA CCGTGGTGGC CATGGGCACA
CCGTTGCGCC CGCGCTTGCA GCAGGCGGGC TACAAGGACA GCTTCAACCT GGCGCTGATC
GTCAACGCCA GCGATGTGGC GCTGCTGATC CCGCCGAGCA TCGGCATGAT CATCTACGGC
GTGGTGGCCC AGACCTCGCC GGCACAGCTG TTCATCGCCG GGATCGGCCC CGGGCTCTTG
ATCCTGCTGC TGATCAGCCT GTGGTGCTAC ATCTACACCC GCTGGCAGGG CATCGAGGGC
TCCGAACGGG CCGGCTGGGG CGCACGCGGC CAGGCGCTGC TGCGCGCGCT GCCGGCGCTG
GGGTTCCCGG TGATCATCGT CGGTGGCATC TATAGCGGCT TCTTCACGCC CACCGAGGCG
GCGGCCATCT CGGTGCTCTA CGCCGCCATC CTGGAGTTCG GGGCGTACCG CAGCCTGGGG
TGGCGGGATC TGCTGGAGGT GGCCCGCTCC ACCGGGCTGA TCACCGCGGT GGTCTTCATC
CTGGTCGGCG CTGGGCAGGC CTTCGCCTAC AGCCTCTCCT TCGCGCAGAT CCCGCAGGAG
CTGGTCGGGC CGCTGATCGA CGCCGTCGCC CACGACCCGA CCCTGGCCCT GCTGGCCATC
GCGCTGATCT ACTTCATCGG CTGCATGTTC GTCGACCCGA TCGTGGTGAT CCTGGTCTTC
ACGCCGATCC TGGCACCGCT GGTCGAGGCC GCTCAGCTCG ACCCGGTCCT GGTGGGAACG
CTGGTGGTGC TGCAGGCGGC CATCGGCTCG GCGACGCCGC CCTTTGGGGT CGACCTGTTT
ACGGCGATCG CCGTCTTCCG GCGGCCGTAC CTCGAGGTGA TCCGCGGGAC GCCGCCGTTC
ATCGCCATCA TGATCCTGGC CACGCTGCTG GTGATCTTCT TCCCGGAGAT CGCCCTGTTC
CTGCGCGACC TCGCCTTCGG TTAG
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| Protein sequence | MTTLVITVML ILLLLGFPLM VPLLAGALLI LIVELPFIGA DALVRQMITG IQPVVLSAVP
LFILAADIMT RGRTANTLLD LVATAIGHIR GGLPITTAVS CALFGAVSGS TQATVVAMGT
PLRPRLQQAG YKDSFNLALI VNASDVALLI PPSIGMIIYG VVAQTSPAQL FIAGIGPGLL
ILLLISLWCY IYTRWQGIEG SERAGWGARG QALLRALPAL GFPVIIVGGI YSGFFTPTEA
AAISVLYAAI LEFGAYRSLG WRDLLEVARS TGLITAVVFI LVGAGQAFAY SLSFAQIPQE
LVGPLIDAVA HDPTLALLAI ALIYFIGCMF VDPIVVILVF TPILAPLVEA AQLDPVLVGT
LVVLQAAIGS ATPPFGVDLF TAIAVFRRPY LEVIRGTPPF IAIMILATLL VIFFPEIALF
LRDLAFG
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