| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0448 |
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| Symbol | |
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| ID | 4711471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 514105 |
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| End bp | 515127 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639854907 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001002038 |
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| Protein GI | 121997251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGTT ATGCCATCGC TACCGTGCTG CTTGGCAGCG TCGCCTTCGC CGGAGCCGCC
CACGCCGATC AGTGGCGGAT CGCCCTGGAG GAGGTGGAAG GCAGCATCCA GTACCAGTAC
GCCGAGCGCT TTGCCGAGGA GGTGGAGGCC CGCACCGACG GCGAGGTACA AGTCGATCTC
TTTCCCTACG GCACCATCGG CGAGATGGGA GATATCTACG AGCAGCTGCA AGGCAATGTG
GTGCAGTTCG CTTTCGGCTC CGGGGCGCTG GGCGCGACCG TACCGGAGAG TCAGCTGTTC
AGCGTCAATT TCGTTCTCAG TGATGACGAA TACGTCAATA CCCGGGCGTT GAACGATCCC
CACTTCCTGC ACAGCGAACC GGTCCAGCAG GCCTTCGGTG AGCGCGGGAT GGAGCTGGTC
TCGGTCCTGC CCGAGGGCTG GCAGGTGTGG AGCGCCAATG AGCCGATCCG CACCCCCGAG
GACTTCGACG GCGTGCAGAT CCGCACCATG GACAACCGGC TGCTGCGCGA GACGTACCGT
CAGTACGGCG CGGATCCGAC CCCCATGGCC TACGGCGAGG TCTACGGCGG GCTCGAGCAG
GGCGTCATCG ACGGCAACGT CCAGCCGTAC TTCGCCCACC AGGAGATGGG CTTCTACGAG
GTCCAGGACT ACTTCATCGA GGCGCGCCAG GCGCAGTTCA TCGCCGGTTT CATGGCCAGC
TCCATGTTCT TCGACGCGCT CCCCGACGAA AAACAGGAGA TGATCCGCGA GATCACCGCC
GACATGGTCG ACTGGGCCCA CGACATGCAG CAGGAGGTCA ACGAGCAGCG GCTGGCCGAC
ATGAAGGCCA ACTCGGATAT CGAGGTCATC GCCCTCGATG AGGACGAGCG GGACGCCTTC
CGCGAGCGGG CCCTGCCGAC CCGCGATACC TACATCGACG AGGTCGGCGT CCGCGGCGAG
CAGGCCCTGG ATCGACTGCT CGAGGCCGTC GATCAGGCCG AGGACGAGCA CGGCGCCTCG
TGA
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| Protein sequence | MHRYAIATVL LGSVAFAGAA HADQWRIALE EVEGSIQYQY AERFAEEVEA RTDGEVQVDL
FPYGTIGEMG DIYEQLQGNV VQFAFGSGAL GATVPESQLF SVNFVLSDDE YVNTRALNDP
HFLHSEPVQQ AFGERGMELV SVLPEGWQVW SANEPIRTPE DFDGVQIRTM DNRLLRETYR
QYGADPTPMA YGEVYGGLEQ GVIDGNVQPY FAHQEMGFYE VQDYFIEARQ AQFIAGFMAS
SMFFDALPDE KQEMIREITA DMVDWAHDMQ QEVNEQRLAD MKANSDIEVI ALDEDERDAF
RERALPTRDT YIDEVGVRGE QALDRLLEAV DQAEDEHGAS
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