| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0367 |
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| Symbol | |
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| ID | 4711361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 432192 |
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| End bp | 433772 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854830 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001001963 |
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| Protein GI | 121997176 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0802684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCC CCTATCACCG AGTGATCCAC GAGAACGAGC AACGCTTTCG CATCGCCACG
GACGCCGCCG GGATCGGTGT CTGGGAGCTG GATATGCGCA ATGGCGAATT CTACTGGAAT
CCGCGCATGT ACGACCTCTA CGGGGTCGCC CCGGTGGATG GTCCCCTGGG GTATTCGGAG
TGGGAGCGGC GTCTGTTGCC CGAGGACCGC TGCAGGGCCC TGCAGCGGAT CTGGACGGGG
GTGGAGCAGG GCCATCCCTG GGAGGTCACG TTCCGCATCC GTCGCGGCGA TGGCACGATC
CGGGACATTC GCTCGGTGGG CCAGCAGCTC TACGATGAGC GCGGCGAGCC GAGTCGACTC
TTCGGCATCA ACGAGGACAT CACCGAGCGT TGTCAGGCCG ACCGGGCCCG GGTACAGTCC
GAGCTGGAGC ACTGTCGGGC CCTGAGCGCC ATCGGCCGGG AGTTGCGCAA CCCCCTGAGC
GCGTTGCGGC GGTGCCACGA GCGGCTGGAT TCTGCGGCCC TGGATGCCGA GCAGCGCCAC
TGCCTCGCTC TGGCCCGGAT AGCCAGCGAC ACCCTGCTTG CGCAGATCGA CGCCATTCTC
GATCAGGCGT GGGCAGACAG CAGCCGCGCC GAGGTGCAGG CCGAACCCTT CGATCTCCGC
CGTTGCCTCT CGGAGCAGAT CGCCCTGCTG CGCGAGCTCG CCGAGCGCAA AGGACTGATC
CTGTCCCTGG AGTGGGGGCG CGATCTGCCG GCTCGGGTCT GCGGTGACGA GACCCGGCTG
TTGCAGGTGG TCCACAACCT CACCCGCAAC GCCATCCAGT ACACCGATCA GGGGTGGGTG
TGCGTGCGGG TGCGTCGCTT GGATGCGACA CGCATTGAGG TGGCGGTGGC CGATACCGGG
CCCGGGATCC GGCCGGAAGA TCAGGATCTC ATCTTCGAGG CGTTTCGCCG CGAGCGCTCC
GCCGGGAACG GACGCGGGGG CAGCGGGTTC GGGCTCTACA TTTGCCGTCA GGTGGTCTGG
CTGCTCGGGG GTGAGATCCG GGTGGAGAGC GAGCCCGGGG CCGGGGCGAC CTTCACCTTC
TCCGCCGAAT ACCCAGAGGT TGCTGAAGGC GAGGGCTCGG GGTGTTGCGA GACCGATACG
GTGCCCCCCG AAGCGAGGCC GGCGCACCGC CGGTCCGCGG GGCTGGATGT GCTCGTCGTG
GCCAACGATC CGGATCAGGG GCGGTTACTC TACGAGCTAC TGCTGCGCAT TCATTGTGCC
CCGCGCCTGG TGGACAACGG CGCCGATGCC CTCGCGGAGT GGCAGCGCCA GGCGCCGTCG
CTGATGCTCC TTGAACTGGA GCTGGGCGAT CTGGATGGGC GCACGGTGGT TCAGCGGGTG
CGTGAGGCCG AGCGAGGGGT CGATGCACCG CGAACGCCGA TCGCGGTCAT GACTGCCTAC
CCCCTGGCCG AGGTGCAGCG CGACTGCCTG CAGGCCGGCG CCGATCAGGT GCTCAAGCAG
CGGGTCGGGC TGGCCGCCCT GCAGCAGCTC ATCGGTCGCG TGCGGGGGGA GACTCCCCAG
ACGCTGCGCT GTCCGGTGTG A
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| Protein sequence | MSTPYHRVIH ENEQRFRIAT DAAGIGVWEL DMRNGEFYWN PRMYDLYGVA PVDGPLGYSE
WERRLLPEDR CRALQRIWTG VEQGHPWEVT FRIRRGDGTI RDIRSVGQQL YDERGEPSRL
FGINEDITER CQADRARVQS ELEHCRALSA IGRELRNPLS ALRRCHERLD SAALDAEQRH
CLALARIASD TLLAQIDAIL DQAWADSSRA EVQAEPFDLR RCLSEQIALL RELAERKGLI
LSLEWGRDLP ARVCGDETRL LQVVHNLTRN AIQYTDQGWV CVRVRRLDAT RIEVAVADTG
PGIRPEDQDL IFEAFRRERS AGNGRGGSGF GLYICRQVVW LLGGEIRVES EPGAGATFTF
SAEYPEVAEG EGSGCCETDT VPPEARPAHR RSAGLDVLVV ANDPDQGRLL YELLLRIHCA
PRLVDNGADA LAEWQRQAPS LMLLELELGD LDGRTVVQRV REAERGVDAP RTPIAVMTAY
PLAEVQRDCL QAGADQVLKQ RVGLAALQQL IGRVRGETPQ TLRCPV
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