Gene Hhal_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0140 
Symbol 
ID4710691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp159974 
End bp161173 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content71% 
IMG OID639854598 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001001736 
Protein GI121996949 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGGG CGCAGATCCT CCAGCCCATC CACTGGCCGC GCACGGCCCA CTACCCCGGG 
GCGGTAGAAC GGTTGCAGCC CTGGGTGAAA GAGCTTTGCC CGGAGCCCGG TACGCTGGTC
CTGGTCACCG GCCGCAATAC GCTGGCGTAC CTGGCGGCGG CGCAGGAGGC CGTGGACAGC
CTAAAGGCGC AGGGGTGGCG TGTGGCGACG GTCATCGTCA CCGGCGAGCC GAGCGCCGAG
TGGGTAGATG AGCAGCGTCA GGGTATCCCG GCCGGCGGTT CAGATCTGGT GATTGCGCTG
GGCGGGGGGA GTGTCCTCGA CGTCGGCAAG ACCCTGGCGG CGATGGCCTG TGAAGAGGGG
CCGACACGGG CCTACCTGGA GGGCGTGGGC GATCGGACGC CCTCCGGGCG CCGCCTGCCT
TGGCTGGCCG TGCCGACCAC CATGGGGACG GGCAGCGAGG TCACCCATAA CGCCGTACTC
GGCCAACCCG GCCTGGAACA GGGCTACAAG AAATCCCTGC GTCATCCCCA TTACGTGGCG
GATCGGGTGG TTCTCGATGC GCGGCTGACG GCGTCCGTGC CGCGTTCGGT GGTTGCCAGT
GCGGGGATGG ACGCCTTTTC GCAATTGCTG GAGAGCTACC TGGCGCCCAC CTCCTCGCCG
CTGCTCGACG GCTGGCTGGT CTACGGCCTG GAGCTGGCCG GTGGGGCCCT CCCGGAGTTG
ATCCGCCGCC ACGGCGATGC CGATCTCGAG GCGCAGCGCC ACGACATGGC GCTGGCTGCC
AGTCTCTCGG GGGTGGCGCT CACCTATACC GGGCTAGGCA TCGTCCACGG GCTCATCGGG
CCGCTCGGGG CGGTGGCGTC CGTCCCCCAC GGGGCGGCCT GCGCCAATGT GCTCCCCCCG
GCGATGGCGC ATACCCTGCG CCAGGCTCGA GCCGTGGGCG GGGCGTCTCG GCAGCGGGTG
GAGGATCGGA TGGCTGCGGT CTCCGGCCGG CTCGGCGGCG AGGCCCGGGC CGACGCCCTG
GTCGAAACCC TAGAGCACTG GCGGCAGGAG GCGCGTACGC ACGCCGGACT GGTGGGGCTG
TCCGGCTACG GCATCGAGCC CCGGCACCTG GAGGCCGTCG TGGCGAAGGG ATCGAACCGG
CGCAACCCGG TGGCGCTGGA TGCCGAGCAG TGGCGGTCGA TCCTGGAGGA GAGCCTTTAG
 
Protein sequence
MAGAQILQPI HWPRTAHYPG AVERLQPWVK ELCPEPGTLV LVTGRNTLAY LAAAQEAVDS 
LKAQGWRVAT VIVTGEPSAE WVDEQRQGIP AGGSDLVIAL GGGSVLDVGK TLAAMACEEG
PTRAYLEGVG DRTPSGRRLP WLAVPTTMGT GSEVTHNAVL GQPGLEQGYK KSLRHPHYVA
DRVVLDARLT ASVPRSVVAS AGMDAFSQLL ESYLAPTSSP LLDGWLVYGL ELAGGALPEL
IRRHGDADLE AQRHDMALAA SLSGVALTYT GLGIVHGLIG PLGAVASVPH GAACANVLPP
AMAHTLRQAR AVGGASRQRV EDRMAAVSGR LGGEARADAL VETLEHWRQE ARTHAGLVGL
SGYGIEPRHL EAVVAKGSNR RNPVALDAEQ WRSILEESL