Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0095 |
Symbol | |
ID | 4710551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 109426 |
End bp | 111753 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639854553 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001001692 |
Protein GI | 121996905 |
COG category | [R] General function prediction only |
COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATC CGACGACTCA GGTCACCGAA ACGGGCAGGG GCGAACGTCC GGCCCGTGGC CTGCCCGACG CAGCGCGCCG GCGCCGTCTG CGCCGCTGGC GGGGCACCAA GGACTGGATC AGCCGCGGAA GCGTGGCCAC CTTCGGCGTG GGGGTGATCG GCGCACTGGC GCTGATGTTC GTCTACCTGT TTTCGGAAAC TATGCCCATC TTCGGCGAGC CGGAGATCCG CCCTGCGGCG GTCTATCCGG CCCCCGGCGG GGAAGACTTT GGCGCCACGC TACACACCGC CATGGAGCGC TATCGCGAGG TCGGCGTGCG CTTCACGGAC GGGGCCCGTT ACGCCTTCTT CAACCCCCGC AGCGGCGAAC TGATCGAGCA GGGTCAGCTC AACAAGCCCT CCGGCGCGCA GATTCGCAGC TTCGATACCG CCGAGGCCCG CCACCGATTG GTGGGGTACG GCCTCGATGA CGGGACGGCG ATCTTCGCCC GTCACGACTA CGACGTCAGT TACCCGGACG GGGAGCGCCT GGTGACTCCG TCGATCACCT ACCCGGAGGG TGACGGCGAG CCGCTGGAGA TCTTCGCCGA GGACGGTTAT CCGCTCGACG CCATCGGTGT CCAGCGTGGA CGCCAGGGGT CTGCCGTGGT GGGGGCGAGC AACGAGCATG AGGCCCTGCG AATGGTCCTC TTTGAGGAAG AAACCGACTT CCTCACCGGC GAGGCAACCG TCGAGCGCGA GGTCTACGAC CTGCCCTGGC CGGAGTCGGG AATCGAGGTC ACCCAGATCC TCCTCGACAC CACCATGCGC AACCTCTTCG TCGGCGATGC GCAGGGGCGT CTCCACTACT TCGACGTCTC GAATCTGAAC CGCCCCCGGC TGGTTGGCAC GGTGCGCGCC ATCGAAGGGG ACGACGCGGA GGTCACGCAG CTTCAGTTCC TGCTCGGGGC CGCGTCGTTG ATCGCCGGCG GTTCGGATGG GTCGGTGTCG CAGTACATGG TGACCCGCGA CGAGGAGCGT GAGCGGCGGC TGACGCGGAT CCGTACCTTT GATGGCCATC CGGACGCGGT CAGTAGCATC GCACCCGAGC ACGCGCGCAA GGGCTTCGCG ACAGGGGCGG TCGACGGGAC CGTGCAGCTG CACTACGCCA CTTCGTCACG GACCCTGACC CAGCTGGCGC TGGAAGGCGG GAGTCCGGTG TCGGCCCTGG CCATGGCGCC GCGCCAGAAC GCGATGATCG CCGTGGGCGA AGATGGCCGG TTCAACTACC TGGATGTTGA CAACCCGCAC CCGGAGGTCT CATTCGCCGC CCTGTGGCAG AAGGTCTGGT ACGAGGGTCG GGACGACCCG GCCTACGTCT GGCAGTCGTC CTCGGCCACC GACGAGTTCG AGCCCAAGTT CTCGCTGGTC CCGCTGACCG TCGGCACGTT GAAGGCGGCG TTCTACGCCA TGCTCTTCGC CACGCCGATC GCCATCCTGG GCGCGATCTA CTCGGCGTAC TTCATGTCGG CGCGGATGCG GCAGACGACC AAGCCCGCCA TCGAGATCAT GGAGGCCCTG CCGACGGTGA TCCTCGGCTT CCTCGCCGGC CTCTGGGCGG CCCCGTTCTT CGAGCGCAAT CTGCCGGCGG TCTTCTCCAT CCTGATCGCC TTGCCCTTTG CCATGGTCCT GGCGGGCTGG TTGTGGACCC GCGTCTTCCC CGAGGGGATC CGCAGCCGGG TGCCCCCGGG CTGGGAGGCC GCACTGCTCA TCCCCGTGGT GATCGGAGTC GCCTGGCTGG GTGTTGCCCT CAGCCCCTAC ATGGAGCTGG CCTTCTTCGG TGGCGACATG CGCCAGTGGC TCACCGACCA GGGCATCGAC TACGACCAGC GCAATGCCCT GGTGGTAGGC ATCGCCATGG GGTTCGCGGT GATCCCGACC ATCTTCTCGA TCTCCGAGGA TGCGGTCTTC AACGTGCCGC GACACCTCTC CCAGGGGGCG CTGGCCCTGG GCGCTACGCC CTGGCAGGCG GTGGCCACGG TGGTCCTGCT CACCGCCAGC CCGGGCATCT TCTCGGCGGT CATGATCGGG TTCGGTCGTG CCGTGGGCGA GACCATGATC GTGGTCATGG CCACCGGGAA CTCGCCGGTC ACCAATTTCA ACCTGTTCGA AGGCATGCGC ACACTCTCGG CGAACATCGC CGTGGAGATG AAGGAGACGG CGCAGGGGAG CAGCCACTAC CGGATCCTCT TCCTCGCCGC ACTGGTGCTC TTCGTCCTCA CCTTTTTGGT GAACACCGTG GCCGAGATCG TCCGCCACCG CCTGCGCAAG AAGTACAGCG CACTGTAA
|
Protein sequence | MSDPTTQVTE TGRGERPARG LPDAARRRRL RRWRGTKDWI SRGSVATFGV GVIGALALMF VYLFSETMPI FGEPEIRPAA VYPAPGGEDF GATLHTAMER YREVGVRFTD GARYAFFNPR SGELIEQGQL NKPSGAQIRS FDTAEARHRL VGYGLDDGTA IFARHDYDVS YPDGERLVTP SITYPEGDGE PLEIFAEDGY PLDAIGVQRG RQGSAVVGAS NEHEALRMVL FEEETDFLTG EATVEREVYD LPWPESGIEV TQILLDTTMR NLFVGDAQGR LHYFDVSNLN RPRLVGTVRA IEGDDAEVTQ LQFLLGAASL IAGGSDGSVS QYMVTRDEER ERRLTRIRTF DGHPDAVSSI APEHARKGFA TGAVDGTVQL HYATSSRTLT QLALEGGSPV SALAMAPRQN AMIAVGEDGR FNYLDVDNPH PEVSFAALWQ KVWYEGRDDP AYVWQSSSAT DEFEPKFSLV PLTVGTLKAA FYAMLFATPI AILGAIYSAY FMSARMRQTT KPAIEIMEAL PTVILGFLAG LWAAPFFERN LPAVFSILIA LPFAMVLAGW LWTRVFPEGI RSRVPPGWEA ALLIPVVIGV AWLGVALSPY MELAFFGGDM RQWLTDQGID YDQRNALVVG IAMGFAVIPT IFSISEDAVF NVPRHLSQGA LALGATPWQA VATVVLLTAS PGIFSAVMIG FGRAVGETMI VVMATGNSPV TNFNLFEGMR TLSANIAVEM KETAQGSSHY RILFLAALVL FVLTFLVNTV AEIVRHRLRK KYSAL
|
| |