Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0014 |
Symbol | |
ID | 4710147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 14225 |
End bp | 15424 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639854470 |
Product | TraB family protein |
Protein accession | YP_001001611 |
Protein GI | 121996824 |
COG category | [S] Function unknown |
COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGAAA CCACCCCCAG CGGTCCGCGC AAGCACATCA CCGTCAACGG CACCGAGTTC GTGCTCCTGG GTACGGCGCA CATCTCCCAG GCCAGTACCG AAGAGGTCCA GCGTGAGGTG GCCAGTGGCG CCTACGATGC GGTCGCCATC GAACTGTGCG AGAGCCGTCT GCGCGCCTTC CGCGAGCCCG ATCATCTGGA GCGGATGGAC CTGTTCCAGA CCCTGCGTGA CGGACGCGGG GGACTGGTCA TGGCCAGTCT CGCGCTGGGC GCCTATCAGC AGCGCCTAGC GGAGCAACTC GGGGTCGATC CCGGGGCGGA GATGAAGGCG GCCGCGGCCG GGGCGGAGCA GTATGGGGCC GATCTGGTGC TGGTTGACCG TGAGGTCGGG GTCACCATGC GCCGCCTCTA CCGCAATGTG CCCTGGTGGC AACGCTTCGG GCTCATCGGC GGACTGATCG GCAGCCTCGC CTCTTCCCAG CGGATCAGCA GCGAGGAAGT GGAGCGGCTT AAGCAAGGCG ACCTGTTGGA GTCGACCTTT CGCGAGCTGG CCCAGAGCAG TCGAGCCCTG TACCAGCCGC TGATCGATGA GCGCGATCGG TACATGGCTG CCAGGCTCCT GGAGTCCGCC GCCGGGCGCT ACAAGCGTGT CCTCGTCGTC CTCGGGGCCG GGCACCTGGA GGGGGTGACG CGCTATCTGG GGCAGGCCTC GGCGGATCCC GGCGCCGAGC GCGAGGCGCT GGACCGTATG CCGCCCCCGG CACGCTGGCC ACGTTACCTG GCCTATCTGG TCGCCATCGT GATCATCTCC GGCTTCGTCA TCGGGTTCAG CCGCAGTCCG GAACTGGGCT GGACCCTGGT CGCCACTTGG GTGCTGATCA ACGGTGGCTT CTCGGCCCTG GGCGCCGCCC TCGCCTACGG CCACCCGGTC ACCGTTGCCG GGGCCTTCCT GGCCGCCCCC CTGACATCGC TCAACCCGAC CATCGGCGCC GGGTTTGTCG CAGCAGCGAT CGAGCTGACC GTCCGGAGAC CGCGGGTCGG CGACTTCCGC GCCCTGCGCC AGCACGTGGC GCACTGGCGC GGCTGGTGGA CCAACCGAGT GGCCCGAACC CTGCTAGTGT TCTTCTTCGC CTCGCTCGGT TCGGCCGTTG GCACCTATCT CGCCGGCGCA CGCATCATTG AGCGCCTGAT TGCCGCCTAG
|
Protein sequence | MPETTPSGPR KHITVNGTEF VLLGTAHISQ ASTEEVQREV ASGAYDAVAI ELCESRLRAF REPDHLERMD LFQTLRDGRG GLVMASLALG AYQQRLAEQL GVDPGAEMKA AAAGAEQYGA DLVLVDREVG VTMRRLYRNV PWWQRFGLIG GLIGSLASSQ RISSEEVERL KQGDLLESTF RELAQSSRAL YQPLIDERDR YMAARLLESA AGRYKRVLVV LGAGHLEGVT RYLGQASADP GAEREALDRM PPPARWPRYL AYLVAIVIIS GFVIGFSRSP ELGWTLVATW VLINGGFSAL GAALAYGHPV TVAGAFLAAP LTSLNPTIGA GFVAAAIELT VRRPRVGDFR ALRQHVAHWR GWWTNRVART LLVFFFASLG SAVGTYLAGA RIIERLIAA
|
| |