Gene Haur_5269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5269 
Symbol 
ID5737227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009974 
Strand
Start bp51029 
End bp51946 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID641282433 
Producthypothetical protein 
Protein accessionYP_001548024 
Protein GI159901779 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACC GGAACGAATC GGGGCGACTG ATGGGGCGAA TGCGCGTTGG AGGGTGGATG 
GGGGTGGGGA TGGTTGGTCT CGTGGCGTGG CTGCTTGCCC TGCCAGCAGT GTATCCAGCG
GGGGCGGCGA CCGATCCGCC GCTGCATGGA GGCACGAATA CTGGGGCGGA TCGGCCCAGG
AGGTCGGTGC CCACGCCAAT CCTCGATAGG GGTTGGGACT ATGCCTACCA CCAGGCCATG
GGGGTCGATC CGCAGGTGGA ATTGGTTCCT GGGCAAACCT ATCCCTTTGT GCATGCGGCG
CATGGGGTGA TCGACCAAAC GACGGGGGTG ACGATCTCCG TGATCAGACC CGCAGAGTCC
ATGACTGACT TGAGCATTCT CTATGGGACG GGCATCCCGA ATAATGTTGC TCCGTACCAA
TCCTGTGACC TAGAATTCGC CTTTGTCTTC GTCGGCAGCT TTCGTGGTCA ACCGGAACAA
TCGCACTTTA TCGAACAGTG CATGATTCCG CCATACCCCA GCGGAACGCG GGTCTGGTAT
CGGGTGTACG GAGCGCCGAG TGTTGGGGAA GACCCATTCT ATCGATTCTT ATTGCCCGGT
CTCGGTCTTG AGCCGTGTAC GCAGATTAAC ATCCTCGGCC AATGTATCCA TCCAAGCCTA
CTGTTTCCTG AGCTACACCT GCCGTATAAC TTCTACGATG TCGGCAATGC CAGTCCAACG
CCGACCAATA CGCCAACGGA GACCCCGACC ACCACACCGA CCAATACGCC AACGGAGACC
TCGACACCAA CGAATACACC AACCAACACG CCGACGGAGA CCCCGACACC GACCAGCACA
CCAACGAGCA CGCCAACCGC CACCATGACC CCGATTCCGC CGCGCTCCAC CGTGTTTTTG
CCGTGGGCGC AGAAGTGA
 
Protein sequence
MDHRNESGRL MGRMRVGGWM GVGMVGLVAW LLALPAVYPA GAATDPPLHG GTNTGADRPR 
RSVPTPILDR GWDYAYHQAM GVDPQVELVP GQTYPFVHAA HGVIDQTTGV TISVIRPAES
MTDLSILYGT GIPNNVAPYQ SCDLEFAFVF VGSFRGQPEQ SHFIEQCMIP PYPSGTRVWY
RVYGAPSVGE DPFYRFLLPG LGLEPCTQIN ILGQCIHPSL LFPELHLPYN FYDVGNASPT
PTNTPTETPT TTPTNTPTET STPTNTPTNT PTETPTPTST PTSTPTATMT PIPPRSTVFL
PWAQK