Gene Haur_5266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5266 
Symbol 
ID5737224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009974 
Strand+ 
Start bp41257 
End bp42417 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID641282430 
Producttransposase mutator type 
Protein accessionYP_001548021 
Protein GI159901776 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.801188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCCA GCAAGAAGCA TACCCATTCG CCCGTGATCG GTCAAGCCGA AGCCCAAGCC 
AGTTTCCAGC AGCTGGTGCA GCACCAGATT CGGCAGGCAA TTCGCGCCAC CTTCATCGAC 
ATTTTGGAAG ACGAAGTGGC GGCCTTCATC GGTGCACAGC CCTATGAACG TACCGACGAG 
CGGCGTGACC ATCGCGCCGG ACATCGCTCG CGCACGCTTG GCACGACCGC TGGCGTGATC 
GACGATTTGC CCGTTCCGCG TACTCGTGGT GGCTTTCGCA CCCAGCTGTT TGACCGCTAC 
CAGCGCCGCA TGCACGATGT CGATACCCTG ATGCAGGATA TGTTTGTCGG CGGGGTCAGC 
CAAACCGCCG TTGGCACGGT GGTCGAGCAC TTAACGGGCA ACGCGCCCAG TCCCTCAACG 
GTCTCGCGGG TGTTTCATAC CCTTGATGAC GAGTTTCAGG CCTGGCAAGC GCGTCCGTTG 
CCGCCACGCT ACTGCTATGC CTTTGCCGAT GGCACCTATT TCAGCGTGAT CTACAATGGC 
CAAGGCCAGA AAATGCCCAT TTTGGCCTTG ATTGGCATCA CCCCCGATGG CCAGCGCGAG 
GTGATTGCCT TCACGACGGG TGAGCGGGAA AACCAAGGCG CGTGGGAAAA CCTGCTGGCC 
GACATCAAGG ATCGCGGGGT GGACACCATT GATTTGTGGA TTACCGATGG ACATCAGGCG 
ATGCTGAACG CGATTGCGGC GAAATTTCCC GCGTCCCAGC GCCAGCGCTG TGTCGTGCAC 
AAAATGAGCA ACATCGAAAG CCACATTCCC GAGAAATACC GCGATGCACT GCACGCGGAG 
CTGCGGGCGA TCTTCTATCA ACCCGACCGA GCGCAGGCTG ACCAAGCGGC AGCGGCGTTT 
ATGGCCAAAT ACGAGCGCCA GTACCCATCA GCGATCCGCT GTATGCAACG CGATTGGGAG 
GCCTGTTTGA CCTTCTATGC CTATCCAGAA GGGCATTGGG TGAACATTCG GACATCGAAT 
ATCATTGAAC GGACGTTCGA GGAGGTCAAG AAGCGCAGCA AAAAAATGGC GACGGCCTTT 
CGGAATGAGG GCAGTTGTTT ACTGCTGTTT TATGCGGTCG TTCGAACACT TCAACTTCGC 
AAAATTCGCA TGCCTGGCTA A
 
Protein sequence
MTPSKKHTHS PVIGQAEAQA SFQQLVQHQI RQAIRATFID ILEDEVAAFI GAQPYERTDE 
RRDHRAGHRS RTLGTTAGVI DDLPVPRTRG GFRTQLFDRY QRRMHDVDTL MQDMFVGGVS 
QTAVGTVVEH LTGNAPSPST VSRVFHTLDD EFQAWQARPL PPRYCYAFAD GTYFSVIYNG 
QGQKMPILAL IGITPDGQRE VIAFTTGERE NQGAWENLLA DIKDRGVDTI DLWITDGHQA 
MLNAIAAKFP ASQRQRCVVH KMSNIESHIP EKYRDALHAE LRAIFYQPDR AQADQAAAAF 
MAKYERQYPS AIRCMQRDWE ACLTFYAYPE GHWVNIRTSN IIERTFEEVK KRSKKMATAF 
RNEGSCLLLF YAVVRTLQLR KIRMPG