Gene Haur_4982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4982 
Symbol 
ID5736818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp6318021 
End bp6318557 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content51% 
IMG OID641282149 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_001547740 
Protein GI159901493 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000210563 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTGC TGGCTAGAGG CGAACTGCGC TCGATCCTGC AAACCGAAAT GCCCAACGCC 
CTAGATACCC GTTGGGATAC CCAAGCAACC GACCAACCCG AAGCTCATGG CGAAGGCCAA 
ACCATATTGC TCGATTTCGA TGCAGTGGTT AAGGCTGAGG CACTTGTCGA AGTTGCCCAC 
TTCATCCGTG ATAAATTTGG CTACACTTTG CTTTCTAACA TCACAGCGGT CGATTACCTC 
AAACAAGGGT TAATCGAAGT TGTCTATCAA TTTTATAACG CTGCTGAGGG TGGCCCCGAC 
CTACGGGTGC GGGTGCGGAT TGGTCGTAGC CCAGAAGAGT GTATTGTTCC ATCGCTAACT 
CCCACCTGGC CTGGTGCCGA TTTGCAAGAA CGCGAAGCCT ACGATATGTA TGGTGTGGTG 
TTCCCTGGCC ATCCAAATCT GGCACGGATC TATATGTGGG ATGAGTTTAA GGGCTTTCCA 
ATGCGGAAAG ACTTCCCCAA GACGGGCGAT AAATATACCC ACGTCACGGG AGAATAG
 
Protein sequence
MALLARGELR SILQTEMPNA LDTRWDTQAT DQPEAHGEGQ TILLDFDAVV KAEALVEVAH 
FIRDKFGYTL LSNITAVDYL KQGLIEVVYQ FYNAAEGGPD LRVRVRIGRS PEECIVPSLT 
PTWPGADLQE REAYDMYGVV FPGHPNLARI YMWDEFKGFP MRKDFPKTGD KYTHVTGE