Gene Haur_4922 details

Gene Information

• Locus tag: Haur_4922
• Symbol: rplP
• ID: 5736758
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 6258202
• End bp: 6258639
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641282089
• Product: 50S ribosomal protein L16
• Protein accession: YP_001547680
• Protein GI: 159901433
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.185448
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATGC CCAAGCAGAT GAAATATCGC CGCCCACACC GCCCTCGTAA CATCAAGGGT 
ATTGCACAAC GCGGCGCAAC TGTGGCATTC GGTGATTTTG GTTTGGTCTC GCTCGAAGCT 
GGCTGGATCA CCAGTCGCCA AATCGAGTCG GCCCGCCGTA CCATCACCAA CTATGTGAAG 
CGGGGCGGTA AAGTTTGGAT TCGGATCTTC CCAGATCGTC CAATTACCCA AAAGCCTGCT 
GAAACACGGA TGGGTTCCGG TAAAGGTTCA GTTGAATACT ATGTCGCAGT GATCAAGCCA 
GGTCGCGTGT TGTTCGAATT GAACGGCGTG CCCGAAGATG TGGCCCAAGA AGCACTGCGC 
CGCGCTGCCC AAAAATTGCC AGTCAAGTGC AAATTCGTAA CCAAGGCATC GCAGGAGGTT 
GGCTCAAATG AAGGCTAG 

 

Protein sequence

MLMPKQMKYR RPHRPRNIKG IAQRGATVAF GDFGLVSLEA GWITSRQIES ARRTITNYVK 
RGGKVWIRIF PDRPITQKPA ETRMGSGKGS VEYYVAVIKP GRVLFELNGV PEDVAQEALR 
RAAQKLPVKC KFVTKASQEV GSNEG