| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4808 |
|---|
| Symbol | |
|---|
| ID | 5736653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 6133951 |
|---|
| End bp | 6134919 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641281974 |
|---|
| Product | parB-like partition protein |
|---|
| Protein accession | YP_001547567 |
|---|
| Protein GI | 159901320 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCA AAAAACGTGG TTTGGGCCAA GGTTTAGGTG CGTTGATTCG CCCTGATCCT
ACAACATCAA TGCCAATGGT CGGCGCATTA CATAGCGTGC CAATCGAATC AATCGAGGCG
AATCCGCATC AGCCGCGCCA AATTTTTACC CCCGAAGCGC TCGAAGAATT GAGCGCTTCA
ATTGCGACCC ATGGAATTTT GCAACCTTTG GTGGTGACGC GCACCGCGAC TGGCTATGAG
TTGATCGCTG GCGAACGCCG CTGGCGGGCA GCTCAACAAG CTGGGTTAAG CGAAGTTCCG
GTGATCATCA AAGAGGTTAC GCCCCAAGAG CGGCTTGAAT TGGCCTTGGT TGAAAATATC
CAGCGAGCCG ATCTCAACCC ATTGGAAGAA GCTCAAGCCT ACCAATTGTT ACACGATGAG
TTTAGCTTGA GCCATCAAGC CATTGCCGAG CGGGTTGGCA AAAGCCGCCC TGCGATCACC
AATGCGCTGC GTTTGCTCAA ATTGCCCTCG CCCTTGCAAC AAGCAGTGAT GGAGCAGCAA
CTCACGGCGG GGCATCTCAA GCAGTTAATC ACGATCGATG ATGAGCGCAC CCAGATTTTG
GCGATGGAGC AAATTCTAGA GTTTCGGCTT TCGGTGCGCG AGGCCGAAAA AATGGCCCAG
TTGATTAAAC ACGAAAGCCA AACCCCAGCG CAAGCCAGAA TCGCCATTCA GCAACGCGGC
GCGGCTCCCC GTGCATCGCG GCGCAACGGT GCACCAACGC CAGCCGCCCC AACCCGCAAC
AGCATCCCAG CCGAGCCAGT CGTGCCTAAT GTTGACGATA CGGCAGCGGT CGATCAACTG
ACCCGTCAAC TTGGCACAAA AGTTGAAGTT AAACGCCAAG GCAATGGCGG CTATGTCCGC
ATCGATTTCT ACTCCGATGA GCAACTGATT GCCTTGATTG AATCATTGCT CAATGGAGAA
ACCTTGTGA
|
|---|
| Protein sequence | MNPKKRGLGQ GLGALIRPDP TTSMPMVGAL HSVPIESIEA NPHQPRQIFT PEALEELSAS
IATHGILQPL VVTRTATGYE LIAGERRWRA AQQAGLSEVP VIIKEVTPQE RLELALVENI
QRADLNPLEE AQAYQLLHDE FSLSHQAIAE RVGKSRPAIT NALRLLKLPS PLQQAVMEQQ
LTAGHLKQLI TIDDERTQIL AMEQILEFRL SVREAEKMAQ LIKHESQTPA QARIAIQQRG
AAPRASRRNG APTPAAPTRN SIPAEPVVPN VDDTAAVDQL TRQLGTKVEV KRQGNGGYVR
IDFYSDEQLI ALIESLLNGE TL
|
|---|
| |