| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4553 |
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| Symbol | |
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| ID | 5736398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5828034 |
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| End bp | 5830628 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641281715 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001547312 |
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| Protein GI | 159901065 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGG TTGATCCTGA AACGCCGCTG TTTACCTTCG ATGAAGCTGA AGCCCAGCCG
ACGGCCTTAG CCAATGAGTT GACCGAAGCC TTACGCGAGC ATTTTGGCTT GCCTGGCTTT
CGTAGTGGTC AGCAACAAGT AATCGAACGG GTAATGGCTG GCCGATCAAC TCTGGCTTTG
ATGCCGACTG GCGCTGGTAA ATCGTTGTGC TACCAATTGC CTGCATTGCT GCTGCCTCAC
GCCACGATCG TGATCTCGCC GCTGATTGCC TTGATGAAAG ATCAGCTTGA TGGCTTGCCT
GAGGCGGTGC GCGAACGAGC AACCTTTATC AACAGCGCAA TTCCCTTCGA TGAAGTTCGC
ACACGCTTGC GCGGTTTGAG CGAGGGTCGC TATAAATTGG TGTATGTTGC GCCCGAACGT
TTGCGCCAAC GCCAATTTCT TTATGCCTTG CAACAAGTTG GCATTTCGTT GTTTGTGGTC
GATGAAGCCC ATTGTGTTTC GTTGTGGGGT TTCTCGTTTC GCCCCGATTA TCTGTTTATT
CGCGAAGCGC TGCGCGAGCT TGGCAATCCG TTGGTGTTGG GCTTGACGGC AACTGCTAGC
CCAGCCACCG AAAAAGCTAT CTGCGAGCAA CTTGGCGATT TAGAAACTGT GCGAACCAAC
GTATTTCGGC CAAATTTACA TTTCGAGTTG ATCAAAGCCT CGAATAAAGA GAAAAAACAA
GCGGCGATTC TTAGTTTGTG CAGCCAAATT GATGGGGCAA TTATTGTCTA TGCCCGTTCG
CGCAATAGTT GTGAAGAATT GGCCGAGCAG CTGCGCAAAA CTGGCGTTGT GGCCGAAGCC
TATCATGCTG GCTGCCCCGA CCGTGATGCC ATTCAAGATC GCTTTATGCG TGGCGAAACT
CGCGTGATTG TCGCGACCAT CGCTTTTGGC ATGGGTGTTG ATAAGCGTGA TGTGCGGGCG
GTGATTCACG CCAATTTGCC CAAATCGCTA GAAGATTATG CCCAAGAGGC CGGACGAGCA
GGCCGCGATG GCCAAATTTC GCGCTGCATT ATGCTCTACA ACTTTTTCGA TAAACGCCAA
CTCAAGGAAT GGCTCGAAAG CAGCCATTTC GGAGTCGAAG AATTACGCGA ACTCTACAAG
GCAGTTTTGG GGCAAATCGG CAAAGGCCAA GGCACAATCA ATCAAGCTCA GCTGATGGAG
CTTTCGGGCT TTGATGAAAC CCGTTTGCGC GTGGGCTTGG GTATTTTGGA GCATGTTGGG
CTGGTGCGTC GCCATTTCGA TCTGCCGCGA GTTTGCAAAT TACGTCGTGG CGAAGCTCCA
GCTACACCCG AAATCAACCA ACTTTGCGAG TGGTTTAGCT TGGGGCGTTG GTGGCAAGAT
GTGAGCAGCC TCGATTTAGC CGCTGCACTG CGGATTGCCC CTAGCCAGCT TGAGCCAACC
TTGCTCGCTT GGCAAGAACA AGGCTTGCTG GGCTACGAAG GCGTGGCGCG GGAAGTCTTG
CTCGAAGTTT TGCCCTCACC CAAAGATACG CGCGAACGCA TGTATCAAGT TTTGAAGCAA
TGGCGCAGCA CCCAAGAACG CCAACTCGAT TCATTAACCC AATATGTTGA GGCCAGCCAT
TGCCGCCATC GAATTTTGGC GGCGCAGTTT GGTCAACGTC TGCCTGCTTG TGGCAATGCC
TGTGATATTT GCCAATCAGG CCGCATCACC ATCAGCCGAC CACCAAATGT TTTGCAGCCC
CAAACCATGC CGCTGGTTGG CTCCAATTGG GGCAATGGCG GGGCGATCAG CGACCATCAA
CGAATTATGG TTGAGGCGGT GCGCGAACAT CCCCAACAAT TAACCAGTCG CGATTTGGCG
CATATTTTGG CTGGCTCACG CGGTTATAGT TCGCATCCGT TGTTTGGGGC ACTCGCCGAA
CGCTCGTTTG ACTCGATTCG CGCCGAGATT GATGTGTTGG TCGATGCAGG GACGTTGGCT
TATCAAGGCG CAACCTTGGT GGCAGTCGTG GCAGCGCCCA AACGCACAGG CAATCAACAA
CGTGATATCG CGTTGCAAGT GTTAGCGACG CTGACTCGTT TGCCCTATCC CTTGGGGCGA
ACTGGCTTGG TGCGCTTGCT CAAAGGGGTC AGCGATGCCA AACGTTCGCC GGATCATGGC
GTTTTAGCCC ATGCCACGAT GGAGCAAATT GAGGTGGTGG TTGAGGCGTT GGTTGAGGCT
CAGTTGTTGG ATCGCCAGCA GCAGGGCTTA TATCCGTTGT TGGCCTTGAA TAGTGCAGGC
CGTGCGGTTT TGAATGATCC TCAGAGCTTG CCAGTGCTCA ACATTCAGGG CAAACGTGAT
TCGGCCAAAG ATGAGCAGCT TCAGGCTGAT GGCGAATTGT TGCTCTTGCT CAAAAGCTGG
CGCTCCGAGC AGGCCCGCAA ACTCAATCTA CCGCACTATA TGATTATTCC AGATAGCGTG
TTATTTGATT TGGCGGCCTA TCAACCAACC AATACCCAAG AATTAAGCAC AATCAAAGGC
ATTGGCAGCC AAAAATTAGC CCAGTGGGGT GCAGATTTGC TGAGTTTAAT TACAACTGGC
AAGCCGACAA ACTAG
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| Protein sequence | MTLVDPETPL FTFDEAEAQP TALANELTEA LREHFGLPGF RSGQQQVIER VMAGRSTLAL
MPTGAGKSLC YQLPALLLPH ATIVISPLIA LMKDQLDGLP EAVRERATFI NSAIPFDEVR
TRLRGLSEGR YKLVYVAPER LRQRQFLYAL QQVGISLFVV DEAHCVSLWG FSFRPDYLFI
REALRELGNP LVLGLTATAS PATEKAICEQ LGDLETVRTN VFRPNLHFEL IKASNKEKKQ
AAILSLCSQI DGAIIVYARS RNSCEELAEQ LRKTGVVAEA YHAGCPDRDA IQDRFMRGET
RVIVATIAFG MGVDKRDVRA VIHANLPKSL EDYAQEAGRA GRDGQISRCI MLYNFFDKRQ
LKEWLESSHF GVEELRELYK AVLGQIGKGQ GTINQAQLME LSGFDETRLR VGLGILEHVG
LVRRHFDLPR VCKLRRGEAP ATPEINQLCE WFSLGRWWQD VSSLDLAAAL RIAPSQLEPT
LLAWQEQGLL GYEGVAREVL LEVLPSPKDT RERMYQVLKQ WRSTQERQLD SLTQYVEASH
CRHRILAAQF GQRLPACGNA CDICQSGRIT ISRPPNVLQP QTMPLVGSNW GNGGAISDHQ
RIMVEAVREH PQQLTSRDLA HILAGSRGYS SHPLFGALAE RSFDSIRAEI DVLVDAGTLA
YQGATLVAVV AAPKRTGNQQ RDIALQVLAT LTRLPYPLGR TGLVRLLKGV SDAKRSPDHG
VLAHATMEQI EVVVEALVEA QLLDRQQQGL YPLLALNSAG RAVLNDPQSL PVLNIQGKRD
SAKDEQLQAD GELLLLLKSW RSEQARKLNL PHYMIIPDSV LFDLAAYQPT NTQELSTIKG
IGSQKLAQWG ADLLSLITTG KPTN
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