Gene Haur_4469 details

Gene Information

• Locus tag: Haur_4469
• ID: 5736320
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 5715189
• End bp: 5715860
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641281632
• Product: peptidase A24A prepilin type IV
• Protein accession: YP_001547229
• Protein GI: 159900982

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGCCAG CAATTCTGCT TGTGGTTGGA ATCGCAATTG GTTTTGGCCT CAACCCATGG 
ATCACCCAGC TCGCCACTGA TCCCAAAGCG GCTAACCCCT TGCCAATACC ACGACACCCC 
TTGCTTGGCG GCCCGACCTG GGTGGGGTTG TTGGTTGCAG CAGCAAGTGG GCTGATGGCC 
TGGGTTTGCT ATCGTGATTA TGGGGTTTCG CTGCGGGGTT TGTATTGGTA TCTGATCAGC 
GTGGTGTATA TCGTCATTGC AACGGTTGAT TGGAAGGTAC GACTGATTGA TGTGTTGCTG 
GTGATGGCGG CAACTTTAAC GGCATTACTT GGCTCGGCCT TTTTAACCAT TGGCATCAAA 
GCCTCGCTGA TTGGTTCGTT GATTGCTGGA TTATTGTTTT TGCTCTTTTT TGCAGGCTCG 
TTTTTGCTCT TTCCAAATGC CGATACCCCA TTTGGTTTAG GCGATGTCTA TTTGGCATTC 
TTAATTGGGG CAACGCTCGG TTGGCAACAT CTTGGGGTGG CCTTGATGTA TGGCATGGGC 
TTAGCCGGAA TTGCTTCTAT CGGGATTTTG GCTGTGCGTC AATTCAAAGG CGAAGGCACA 
TTATATATCG CCTATGGCAC CTTTTTATGC CTTGGGGTGT TGCTCTACCT GATTCGCTTT 
GGGCCACTTT AA 

 

Protein sequence

MLPAILLVVG IAIGFGLNPW ITQLATDPKA ANPLPIPRHP LLGGPTWVGL LVAAASGLMA 
WVCYRDYGVS LRGLYWYLIS VVYIVIATVD WKVRLIDVLL VMAATLTALL GSAFLTIGIK 
ASLIGSLIAG LLFLLFFAGS FLLFPNADTP FGLGDVYLAF LIGATLGWQH LGVALMYGMG 
LAGIASIGIL AVRQFKGEGT LYIAYGTFLC LGVLLYLIRF GPL