| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4338 |
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| Symbol | |
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| ID | 5736198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5545782 |
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| End bp | 5547017 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281499 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001547098 |
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| Protein GI | 159900851 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA CGCAACCGAC GAATCTTGCT GCTGCGCCCA ACAATTGGCG CGAAGCATTA
GCCGAACGCT TTCGCCAAGG CAACCTAGGC TCGCTGCCAG TGATTATTGG CTTGATTATT
ATTGCATTGG TGTTTCAAAG TATCAATAAA AACTTTCTTA CGCCGCTCAA CCTGACCAAC
TTGATGGTGC AAATCGCCGC GATGGGCACA ATTTCAACGG GAGTTGTGCT AATTTTGCTG
CTAGGTGAGG TTGATCTTTC GGCAGGCCAG GTTAGTGGCT TGGCGGCGGC GGTGATGGCG
GTGTTGGTTT CGCGCCATAA TTTGCCTGCT GCCGTGGCGA TTATTGGGGC AATTGTGGTT
GGAGCCTTGG TTGGCTTGTT GCAAGGTTGG TGGATTTCAA CCTTCCGCGT GCCCTCGTTT
GTGGTTACGC TTGCAGGTTT GCTAGCTTGG CAAGGCTCGC GATTACGAGT GCTTGGTGAC
ACAGGCAGCA TCAACATCAC CAATAAATTT ATTAATGATA TTGCCAACTA TAAACTGCCA
ATTTGGCTTG GCTGGGTTTT GGGGATTGTC AGTGTTGTCG TTTATACCTT GATTGTGTTC
AACGAATATC GCAGCCGCCG CGCTGCTGAA TTGCCAACTG GCTCGTTGAA CGGCGTATTT
TGGCGGGTTG GGGTGGTTGG CGCGAGTGTC TTGGCGGGTG TTGCGATGAT GAGCGTCAAC
CGCAATGCCA ACGCTGCGGG TAACCCAATC CAAGGCGTGC CTAGCGCAGT CATTATCTTC
CTAACGTTTT TGATTATCTT TGATTTTATT ACCCAGCGCA CCCGTTTTGG CCGCTATGTT
TATGCGGTTG GCGGCAATAC CGAAGCTGCT CGCCGCGCAG GAATCAATGT TAATCGGATT
CGGATTACGA TTTTTATGCT GGCTTCGGCA CTCGCCGCCT GTGGCGGGAT TTTGGCCGCC
TCACGTTTGA ACGCGGCCAA TCAATCATCA GGCGATGGCG ACGTGCTTTT GAACGCAATC
GCCGCAGCGG TGATCGGTGG CACCAGCCTG TTTGGTGGGC GTGGCCGAAT TTGGTCGGCT
TTGCTGGGCG CACTAGTGAT TGGGGCAATT GCCAATGGCA TGGATTTACT GGCGCTCAAG
TCATCGATCA AATTTATCGT AACTGGCTCA GTGCTTTTGT TGGCAGTCAC GATTGATGCC
GCCTCACGCG CCCGCCGCGA AAACAGTGGA CGTTAG
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| Protein sequence | MMKTQPTNLA AAPNNWREAL AERFRQGNLG SLPVIIGLII IALVFQSINK NFLTPLNLTN
LMVQIAAMGT ISTGVVLILL LGEVDLSAGQ VSGLAAAVMA VLVSRHNLPA AVAIIGAIVV
GALVGLLQGW WISTFRVPSF VVTLAGLLAW QGSRLRVLGD TGSINITNKF INDIANYKLP
IWLGWVLGIV SVVVYTLIVF NEYRSRRAAE LPTGSLNGVF WRVGVVGASV LAGVAMMSVN
RNANAAGNPI QGVPSAVIIF LTFLIIFDFI TQRTRFGRYV YAVGGNTEAA RRAGINVNRI
RITIFMLASA LAACGGILAA SRLNAANQSS GDGDVLLNAI AAAVIGGTSL FGGRGRIWSA
LLGALVIGAI ANGMDLLALK SSIKFIVTGS VLLLAVTIDA ASRARRENSG R
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