| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4172 |
|---|
| Symbol | |
|---|
| ID | 5736033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5319804 |
|---|
| End bp | 5321306 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641281326 |
|---|
| Product | SpoVR family protein |
|---|
| Protein accession | YP_001546932 |
|---|
| Protein GI | 159900685 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2719] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTCA GCAACAACGA TTTACCCCTC AACTTACAAA AAGCCTGGGA GCAAATTGAT
GGTCATGCCA AACGTTATGG CCTCGATTAC TACCCAATTG TTTATCAGAT CCTTGATTAT
AATACACTGT ACGAAGTTGC TGCAATGGGT GGATTTCCAA CGCGCTACCC GCATTGGCGC
TTCGGAATGG AGTATGATCA ATTAATCAAG GGCCATGTGT ATGGATTAAG CATCATTTAT
GAAATGGTGA TTAATACCAA TCCAGTGTAT GCCTATTTGC TCGAAGGTAA TATGATTGTT
GACCAGAAAA CGGTAATGGC GCACGTTGCC GGCCATGCCG ATTTCTTCAA GAATAATATG
TGGTTTGCGC CAACCAATCG TAAAATGCTC GACACCATGG CCAACCATGC CGGACGAATA
CAACGCTACA TCGATCGTTA TGGCTACGAA ACGGTTGAAG CATTTATTGA TACTTGCTTA
TCAATTGAAA ACTTGATCGA TTATCATTCG CCATATATTA ATCGCCCTGA AGCCCAAACT
AGCCAGCCAA TCGTTGAAGA TGACGATATT GAAGTTGCCG AAGGCTTGCC GTTTGAACGT
TCGTATATGA AGGATTTTAT TAATCCACCG GAATTTTTGC GCCAGCAACG CGAGAAACTC
TTAGAAGAAC AGCAAAAAAT GCGTAAATTC CCTGAGAATC CGCAAAAAGA TGTGCTGTTA
TTCTTGATGA ATTATGCGCC GCTCGATCGT TGGCAGCATA ATATTTTGGA AATTGTGCGC
GACGAGGCCT ATTACTTCGC TCCCCAAGGC ATGACTAAAA TTATCAATGA AGGCTGGGCC
AGCTTTTGGC ATAGCCGAAT TATGACCACT CATGCCGCCG AAACCTCAGA AATTATCGAT
TTTGCCGACC ATCATGCCGG AATTGTCGCA GCCCATCCAG GCCGACTAAA CCCCTATCGT
TTGGGTTTGC TACTGCTGCG CGACATCGAA GATCGCTGGA ATCGCGGGCG TTTTGGCAAG
GATTGGGAGC AATGCGACGA TATGCGCGAG AAGCGCGAAT GGGATTTGAA GCTTGGCAAG
GGTATGGAAA AAGTCTTTGA GGTGCGGCGC TTCCACAACG ATATTACCTT TCTTGACGAG
TTTCTTACAC CTGAATTTTG TGTCGAGAAC AAACTGTTTA CCTTCAAACA CAACAACGAC
ACCGATTTGT ACGAAATCGT CAACCGCGAT TTTGGGGCAA TTAAATCGCA ATTGCTCAGT
GGGTTAACCA ATTTCGGCCA GCCCTATATT TATGTTGAGG ATGGCAACTA CAATAATCGG
GGTGAATTGT ATTTGCGCCA CCGCCATGAA GGCAGCGATT TGCGCATGGA TTATGCCCGC
GACACGCTCA AACATATTCA TACAATCTGG ACGCGTCCGG TCAATCTTGA AACCGTGCTT
GATGATAAAA AGCGCTTGCT GACGTTTGAT GGGAAAGAAT ACAGCGAACG TCGCATCGAT
TAG
|
|---|
| Protein sequence | MPLSNNDLPL NLQKAWEQID GHAKRYGLDY YPIVYQILDY NTLYEVAAMG GFPTRYPHWR
FGMEYDQLIK GHVYGLSIIY EMVINTNPVY AYLLEGNMIV DQKTVMAHVA GHADFFKNNM
WFAPTNRKML DTMANHAGRI QRYIDRYGYE TVEAFIDTCL SIENLIDYHS PYINRPEAQT
SQPIVEDDDI EVAEGLPFER SYMKDFINPP EFLRQQREKL LEEQQKMRKF PENPQKDVLL
FLMNYAPLDR WQHNILEIVR DEAYYFAPQG MTKIINEGWA SFWHSRIMTT HAAETSEIID
FADHHAGIVA AHPGRLNPYR LGLLLLRDIE DRWNRGRFGK DWEQCDDMRE KREWDLKLGK
GMEKVFEVRR FHNDITFLDE FLTPEFCVEN KLFTFKHNND TDLYEIVNRD FGAIKSQLLS
GLTNFGQPYI YVEDGNYNNR GELYLRHRHE GSDLRMDYAR DTLKHIHTIW TRPVNLETVL
DDKKRLLTFD GKEYSERRID
|
|---|
| |