Gene Haur_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4142 
Symbol 
ID5736003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5290252 
End bp5290773 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID641281296 
ProductNUDIX hydrolase 
Protein accessionYP_001546902 
Protein GI159900655 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGTC ATTCGGTTTA CGACAATATT CGAACCCGGG TGATTGTGCT GCGTGAGCAA 
GAACTCTTGA TTATGGCCAC CGAAGATCAG CCAGAATTGG TTTGGCGCTT GCCTGGTGGT
GGTTTAGAAC AGGGCGAATC GTTGGCCGAT TGTGCCGCCC GTGAAGTTTG GGAAGAATGC
GGCATTCGGG TGCAAGTTGG CAAAGTTGCT TTCTTGCGCG AGTGGGTTAT TCCAACCTAT
GCCATCATCG ACCCAAATGA TCGTGAGCCA AACTATGGCT TAGAAGTGTT TCTGTATGCT
ACGCCGTTAG ATCCACAGGC TACACTTCGT GCCGAGGCTG CCGATAAACC AATGCCCGAA
TGGCGCAGCT TGGTTGAAAT AGCCAGCATG CCATTTTGGC CCAAAGAGCT GAAATCGTTG
GCAACGTTTT TGGCCGAAGG CCAACGCCCA AGCGCCGCCC ATTCATTCGT TAGCAGCTTT
GAATCTGGTT GGGCAATCCC ACCAGCAATC GACTGGGCCT GA
 
Protein sequence
MPSHSVYDNI RTRVIVLREQ ELLIMATEDQ PELVWRLPGG GLEQGESLAD CAAREVWEEC 
GIRVQVGKVA FLREWVIPTY AIIDPNDREP NYGLEVFLYA TPLDPQATLR AEAADKPMPE
WRSLVEIASM PFWPKELKSL ATFLAEGQRP SAAHSFVSSF ESGWAIPPAI DWA