| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4104 |
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| Symbol | |
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| ID | 5735965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5237326 |
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| End bp | 5239815 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641281258 |
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| Product | primosomal protein N' |
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| Protein accession | YP_001546864 |
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| Protein GI | 159900617 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.344877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGCCC AGGTTGCGCT CAATGCCTAT TTGCCCGATA ACCCCGAGGC GATTTTGACC
TATGCCGTGC CGCCGCATCT CCGACCTTTG CGTGTAGGTG CGTTGGTGTG GGTTCCGCTT
GGGCCGCGTC GCGTGCAGGG CGTGGTTTTA GAATTTAGCA CTCAACGGCC TCAAGGTTTT
GTGGTGCGCG ATATTTTAGA ACACGCCGAC CCCGAAGCGA TTGCCGCCCC AGCCCAATTG
GCCTTGGCGC AGTGGTTTAG CCAATCTCAA GCCGTGCGTT TGTGGGACGC TGTGCAATTG
ACCATGCCGC CAGGGGTGAA GCAAGAAATT GAGCGCACTT GGCGGCCAAC TGAGCATGGC
CAGAAGATCG AACTTGGCAC GCTCGACGAA CGCGAACGAG CAATTTTGTT TCATTTACGG
CGGGTTGGCG AGCAAAGCGA ACGGCAGCTA CGGGTCGATT TACGTGGCTC AGACGCTGAT
CTGCGGCGTA GCTATACCGA ATTGCATGAA CGTGGATTGA TCGCCTTGGG TAGTTTGGTT
TCGCGACCAG CGGCCAAGCC CAAACGTGAA TGGAGTGCCC AGCCAACCAG CGCCACTCCA
GCCGAAGCCT TGGCTGAGTT GAGCAAAGCG CCACGCTTGG CGGCAATTTT TCAGGCGATT
TTAGAGCAAG CAGTAGATGG CGAACCAGTG CTATTGCCTG AGTTGCGTGA TGTTGGCGCA
AGCTTGAGCC ATTTGCGTAG TTTGGCCTTG CGCAATTTGA TTCAGCTGGA GCAAATTGAG
GTGCGCCGTG ACCCGCTGCT TGGGCGCATC CCACCCTTGG AGTTTCCGCC CGAACTAACG
CTTGAGCAAG AACGTGGTTG GCGGCAGATT GTCGCGGCCC AAGATACAGC AAGTCGCACA
GGCAAGGCTA AACCAATTTT GCTGCATGGC GTGACGGGTA GCGGCAAAAC CGAGCTATAT
CTACGGGCAA TTGGCCGAGC CTTACGCAAT GGTGGCCAAG CCTTGGTGCT CGTGCCCGAA
ATCGCCCTGA CAACCCAGCT GGTGCGCCGT TTTGCTGCCC GCTTTCCGCA ACAATTGGCG
GTGTTGCACT CCGAATTGAG CGTTGGCGAG CGCTACGATG AATGGCGGCG TTTGCGGCGT
GGCGATGCCC AAGTGGCCAT TGGCTCGCGT TCAGCAATTT GGTCGCCCAT GAGCAAATTG
CAGCTAATTA TTGTTGATGA AGAACATGAA CATTCCTTCA AGCACGAAGC CACGCCCTAC
TACCACGCCC GTGATTTGGC AGTGAAATTG GCCGAATTGG CTGGAGCCGT GTTGATTTTG
GGCAGCGCCA CACCCTCGCT AGAAACAGCC TACGCCGTGC AGATCAACAA ATATGAAGTG
TTGGAATTGC ACGAACGGGT TGGGCGCAAA ACGGTGGCGG GGGTCACCAA AGCAGATCCC
ATCCCCATGC CGCCAGTACA AATTGTGGAT ATGCGCAGCG AACTCAAGGC GGGCGTGCGT
TCGATGTTTA GTCGTCCCTT GCAAAGCGCG ATTCAACGCA CCCTCGATAA GCGCGAACAA
ACGATTTTAT TTTTGAATCG ACGCGGGATT GCCTCGTTTG TGATGTGTCG CGATTGTGGC
ACGACGATTC AATGCCCACG CTGTGCCGTA GCCTTGGCGG TGCACGCAAC TGCGGGCGAC
GCGGCTGCGC CAGCAACCCT GCGCTGCCAT TATTGTGGCC ATGTTGATTG GGTTCCGCGT
AATTGCCCAA GCTGTTTCAG CACCCGCATT CGTGATTTTG GGGTTGGTAC GCAGCGGGTG
GTCGAAGAAG TCAAATTGCT CTATCCCCAA GCACGGGTGA TGCGCTGGGA TCGCGATGTG
ACTGGGCGTA AAGGCTCGCA CGAAGCGTTG CTGAACCAAT TTACCCAACA CGAAGCCGAT
ATTTTGGTGG GAACTCAGAT GGTTGCCAAG GGCTTTGATT TGCCGTTGGT GACCTTGGTT
GGAGTGATTA CCGCCGATAC TGCGCTGAAT TTGCCCGATT TTCGCTCGGG CGAGCGCACA
TTTCAATTAT TGGCTCAAGT GGCGGGGCGA GCAGGGCGGC GGGCCGGCGG CGGTCAAGTG
ATTATCCAAA GCTATAATCC TGAACATTAT GCGATTCAGG CCGCCGCCCA GCACGATTAT
CGTCAATTTT ACCGCGAAGA AATTGCCTTT CGCCGCACCG CCCACTATCC ACCATTCAGC
CGCTTGATTC GCTTTATGAC CCAATCGCCA TCGAACAAAA CCGTTGAGCG GGTTGTGCGC
CAATTCGATA CCCAATTGCG CGAGGAGCTA GAACGGCGGC GCATTCGCGA TTGGGCGATT
ATTGGGCCAT CGCCAGCCTT TTTGCAAAAA GTGCGCGATC TCTATCGTTG GCATATTTTG
GTGCGTTTGC CCGACCCCAC TGATTTATTG CACGATTTAA AAATTCCCTC AGGCTGGACG
ATCGATGTTG ATCCGGTTAG TTTATTGTGA
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| Protein sequence | MYAQVALNAY LPDNPEAILT YAVPPHLRPL RVGALVWVPL GPRRVQGVVL EFSTQRPQGF
VVRDILEHAD PEAIAAPAQL ALAQWFSQSQ AVRLWDAVQL TMPPGVKQEI ERTWRPTEHG
QKIELGTLDE RERAILFHLR RVGEQSERQL RVDLRGSDAD LRRSYTELHE RGLIALGSLV
SRPAAKPKRE WSAQPTSATP AEALAELSKA PRLAAIFQAI LEQAVDGEPV LLPELRDVGA
SLSHLRSLAL RNLIQLEQIE VRRDPLLGRI PPLEFPPELT LEQERGWRQI VAAQDTASRT
GKAKPILLHG VTGSGKTELY LRAIGRALRN GGQALVLVPE IALTTQLVRR FAARFPQQLA
VLHSELSVGE RYDEWRRLRR GDAQVAIGSR SAIWSPMSKL QLIIVDEEHE HSFKHEATPY
YHARDLAVKL AELAGAVLIL GSATPSLETA YAVQINKYEV LELHERVGRK TVAGVTKADP
IPMPPVQIVD MRSELKAGVR SMFSRPLQSA IQRTLDKREQ TILFLNRRGI ASFVMCRDCG
TTIQCPRCAV ALAVHATAGD AAAPATLRCH YCGHVDWVPR NCPSCFSTRI RDFGVGTQRV
VEEVKLLYPQ ARVMRWDRDV TGRKGSHEAL LNQFTQHEAD ILVGTQMVAK GFDLPLVTLV
GVITADTALN LPDFRSGERT FQLLAQVAGR AGRRAGGGQV IIQSYNPEHY AIQAAAQHDY
RQFYREEIAF RRTAHYPPFS RLIRFMTQSP SNKTVERVVR QFDTQLREEL ERRRIRDWAI
IGPSPAFLQK VRDLYRWHIL VRLPDPTDLL HDLKIPSGWT IDVDPVSLL
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