Gene Haur_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3979 
Symbol 
ID5735840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5079154 
End bp5079351 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content54% 
IMG OID641281129 
Producttransposase, IS204/IS1001/IS1096/IS1165 family protein 
Protein accessionYP_001546739 
Protein GI159900492 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.271598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATGCGT GGTTGGCAGA CACGGAAGCC AGTGTCATCG GGTTCGCCAG CGGACTGCGG 
ACTGATTATG CAGCAGTCGC CAATGCGCTC ACGCAGCCCT ACGGCAATAG TCCCATCGAA
GCGCATATTC ATCGACTAAA GCTGATTAAC GGACGAGCGA ACTTTGATTT GCTGGGCAAG
CGTGTGCTGG CAATTTAA
 
Protein sequence
MDAWLADTEA SVIGFASGLR TDYAAVANAL TQPYGNSPIE AHIHRLKLIN GRANFDLLGK 
RVLAI