Gene Haur_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3883 
Symbol 
ID5736914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp4875536 
End bp4876570 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content56% 
IMG OID641281034 
Productglycerol-3-phosphate dehydrogenase (NAD(P)(+)) 
Protein accessionYP_001546645 
Protein GI159900398 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.376245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC GGCTTGATGT AGCTGTCATT GGCACTGGCA ATTGGGGCAC AACTTTAGCC 
TTGGTTTTGG CTCGCGGCGG GCGGAATGTC ACGCTATTTG GCCGCAACCA AGCTGAAGTT 
GCCCAATTGC AGGCTGCTGG CGAAAACAGC CGCTTTTTGC CTGGGCAGCG CTTTCCAGCA 
AATTTGGGCT TGGCCTGTGA TCTCGCGCTG GCCGCTCAAG CCCAAGTTAT TCTCCTCGCT 
GTGCCTTCGA AAACGATTCG CAGCAATGCG CTCCAACTTG CTCCACAGCT CGTTGCCGAT 
AGTATTATTT TGAGTTGCGC TAAGGGTATC GAGTCGGGCA GCCTTGAAAC CATGAGCGAA 
GTGCTGGCCG AGGCGCTTGC GCCGCATCCC CGTGGCTTGA TTGGGGCACT TTCGGGGCCA 
AATATTGCCA ACGAAATTGC CCAAGGCCTG CCTGCAACCA GTGTTGTAGC ATTAAGCGAT 
GATCAAGCTG GGCAGCGGGC GCAGAGCTTG CTCACCACCA ATCTGCTGCG GATCTATCGT 
TCGAGTGATG TGGTTGGGGT TGAGCTGGGC GGGGCACTCA AAAATATTGT GGCACTCGGC 
GCGGGCATTT GCGATGGCAT GGGCTTGGGC GATAATGCCA AAGCGGCATT TATCACCCGT 
GGTTTGGCCG AAATGACCCG TTTGGGCATG GCACGCGGCG CACATCCGCT GACCTTTGCA 
GGCTTGGCGG GCTTAGGTGA TTTAATTGCC ACGTGTGCCT CGCCGCACAG CCGCAATCGC 
CGCTTGGGTG AAGCCTTAGC CCGTGGCCAA TCGCTCGAAA TGGCTTTGGC TCAGCTTGGG 
CAGGTGGCCG AAGGCGTGAA TACCACTGCC ACGGCCCGTC AATTGGCCGA GCAGTATGGA 
GTCGAATTGC CAATTGCTGA TGAGTTGTAT CGCGTCTTAT TTGAGGGCAA ATCGCCACAG 
CAAGCAGGCC TCGATTTGAT GCAGCGCGAC CCCAAAAACG AATTGGCTGG GTTGCAAGGG 
CTATTTTCAA TTTAG
 
Protein sequence
MNQRLDVAVI GTGNWGTTLA LVLARGGRNV TLFGRNQAEV AQLQAAGENS RFLPGQRFPA 
NLGLACDLAL AAQAQVILLA VPSKTIRSNA LQLAPQLVAD SIILSCAKGI ESGSLETMSE 
VLAEALAPHP RGLIGALSGP NIANEIAQGL PATSVVALSD DQAGQRAQSL LTTNLLRIYR 
SSDVVGVELG GALKNIVALG AGICDGMGLG DNAKAAFITR GLAEMTRLGM ARGAHPLTFA 
GLAGLGDLIA TCASPHSRNR RLGEALARGQ SLEMALAQLG QVAEGVNTTA TARQLAEQYG 
VELPIADELY RVLFEGKSPQ QAGLDLMQRD PKNELAGLQG LFSI